add r-tscan

2 files changed, 82 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..8c7d08f8df57
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,33 @@
+pkgbase = r-tscan
+	pkgdesc = Tools for Single-Cell Analysis
+	pkgver = 1.34.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/TSCAN
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-combinat
+	depends = r-delayedarray
+	depends = r-fastica
+	depends = r-ggplot2
+	depends = r-gplots
+	depends = r-igraph
+	depends = r-mclust
+	depends = r-plyr
+	depends = r-s4vectors
+	depends = r-shiny
+	depends = r-singlecellexperiment
+	depends = r-summarizedexperiment
+	depends = r-trajectoryutils
+	optdepends = r-batchelor
+	optdepends = r-biocneighbors
+	optdepends = r-biocparallel
+	optdepends = r-knitr
+	optdepends = r-metapod
+	optdepends = r-scran
+	optdepends = r-scuttle
+	optdepends = r-testthat
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/TSCAN_1.34.0.tar.gz
+	sha256sums = f59acc1390b1903c0d2c7a1f4ab07c2c78d7530375af87b7c2908ab5241a0e29
+
+pkgname = r-tscan
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..74663bb5a5c6
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,49 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=TSCAN
+_pkgver=1.34.0
+pkgname=r-${_pkgname,,}
+pkgver=1.34.0
+pkgrel=1
+pkgdesc='Tools for Single-Cell Analysis'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-combinat
+  r-delayedarray
+  r-fastica
+  r-ggplot2
+  r-gplots
+  r-igraph
+  r-mclust
+  r-plyr
+  r-s4vectors
+  r-shiny
+  r-singlecellexperiment
+  r-summarizedexperiment
+  r-trajectoryutils
+)
+optdepends=(
+  r-batchelor
+  r-biocneighbors
+  r-biocparallel
+  r-knitr
+  r-metapod
+  r-scran
+  r-scuttle
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('f59acc1390b1903c0d2c7a1f4ab07c2c78d7530375af87b7c2908ab5241a0e29')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: