add r-ttmap

2 files changed, 52 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..5f7ecf7b6d81
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,18 @@
+pkgbase = r-ttmap
+	pkgdesc = Two-Tier Mapper: a clustering tool based on topological data analysis
+	pkgver = 1.18.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/TTMap
+	arch = any
+	license = GPL
+	depends = r
+	depends = r-biobase
+	depends = r-colorramps
+	depends = r-rgl
+	depends = r-summarizedexperiment
+	optdepends = r-airway
+	optdepends = r-biocstyle
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/TTMap_1.18.0.tar.gz
+	sha256sums = a8084384216eef827105f629ddd980a1d52c94bf00b63e0e686510b7ac2e7206
+
+pkgname = r-ttmap
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..3e4e15143ec1
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,34 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=TTMap
+_pkgver=1.18.0
+pkgname=r-${_pkgname,,}
+pkgver=1.18.0
+pkgrel=1
+pkgdesc='Two-Tier Mapper: a clustering tool based on topological data analysis'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biobase
+  r-colorramps
+  r-rgl
+  r-summarizedexperiment
+)
+optdepends=(
+  r-airway
+  r-biocstyle
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('a8084384216eef827105f629ddd980a1d52c94bf00b63e0e686510b7ac2e7206')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: