add r-turbonorm

2 files changed, 52 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..f7730ad1e302
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,18 @@
+pkgbase = r-turbonorm
+	pkgdesc = A fast scatterplot smoother suitable for microarray normalization
+	pkgver = 1.44.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/TurboNorm
+	arch = x86_64
+	license = LGPL
+	depends = r
+	depends = r-affy
+	depends = r-convert
+	depends = r-limma
+	depends = r-marray
+	optdepends = r-affydata
+	optdepends = r-biocstyle
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/TurboNorm_1.44.0.tar.gz
+	sha256sums = c894ef77621907d6522b612c360c7f780e125c3d212ee4f3ccb79fa9db7a2f03
+
+pkgname = r-turbonorm
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..20c154612f5a
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,34 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=TurboNorm
+_pkgver=1.44.0
+pkgname=r-${_pkgname,,}
+pkgver=1.44.0
+pkgrel=1
+pkgdesc='A fast scatterplot smoother suitable for microarray normalization'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('LGPL')
+depends=(
+  r
+  r-affy
+  r-convert
+  r-limma
+  r-marray
+)
+optdepends=(
+  r-affydata
+  r-biocstyle
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('c894ef77621907d6522b612c360c7f780e125c3d212ee4f3ccb79fa9db7a2f03')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: