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authorBioArchLinuxBot2022-11-07 06:25:51 +0000
committerBioArchLinuxBot2022-11-07 06:25:51 +0000
commit45db5fdb807d462c8d595ee8bdeaa88300aff19f (patch)
treee707962541bf80b0e08f23615d4e91182e017174
parent6fb9fffc972367bd22f2deec84febecde0c41e60 (diff)
downloadaur-45db5fdb807d462c8d595ee8bdeaa88300aff19f.tar.gz
[lilac] updated to 1.7.0-1
-rw-r--r--.SRCINFO9
-rw-r--r--PKGBUILD9
2 files changed, 10 insertions, 8 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 5be6690e6199..536c424ba384 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = r-uncoverapplib
pkgdesc = Interactive graphical application for clinical assessment of sequence coverage at the base-pair level
- pkgver = 1.6.0
+ pkgver = 1.7.0
pkgrel = 1
url = https://bioconductor.org/packages/uncoverappLib
arch = any
@@ -8,6 +8,7 @@ pkgbase = r-uncoverapplib
depends = r
depends = r-biocfilecache
depends = r-bsgenome.hsapiens.ucsc.hg19
+ depends = r-bsgenome.hsapiens.ucsc.hg38
depends = r-condformat
depends = r-dt
depends = r-ensdb.hsapiens.v75
@@ -23,6 +24,7 @@ pkgbase = r-uncoverapplib
depends = r-rappdirs
depends = r-rlist
depends = r-rsamtools
+ depends = r-s4vectors
depends = r-shiny
depends = r-shinybs
depends = r-shinycssloaders
@@ -31,13 +33,12 @@ pkgbase = r-uncoverapplib
depends = r-stringr
depends = r-txdb.hsapiens.ucsc.hg19.knowngene
depends = r-txdb.hsapiens.ucsc.hg38.knowngene
- depends = r-bsgenome.hsapiens.ucsc.hg38
optdepends = r-biocstyle
optdepends = r-dplyr
optdepends = r-knitr
optdepends = r-rmarkdown
optdepends = r-testthat
- source = https://bioconductor.org/packages/release/bioc/src/contrib/uncoverappLib_1.6.0.tar.gz
- sha256sums = 2c8cbc5fe9f2883da696406c1338a51ccee77a348963560fbf7b247c4f7c1b64
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/uncoverappLib_1.7.0.tar.gz
+ sha256sums = 50236b7341e13938c818737ecc1e9fc8441c4d21387511a4362e743b2f2f56bb
pkgname = r-uncoverapplib
diff --git a/PKGBUILD b/PKGBUILD
index 79a3f7b2c091..3e8464f70c62 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=uncoverappLib
-_pkgver=1.6.0
+_pkgver=1.7.0
pkgname=r-${_pkgname,,}
-pkgver=1.6.0
+pkgver=1.7.0
pkgrel=1
pkgdesc='Interactive graphical application for clinical assessment of sequence coverage at the base-pair level'
arch=('any')
@@ -13,6 +13,7 @@ depends=(
r
r-biocfilecache
r-bsgenome.hsapiens.ucsc.hg19
+ r-bsgenome.hsapiens.ucsc.hg38
r-condformat
r-dt
r-ensdb.hsapiens.v75
@@ -28,6 +29,7 @@ depends=(
r-rappdirs
r-rlist
r-rsamtools
+ r-s4vectors
r-shiny
r-shinybs
r-shinycssloaders
@@ -36,7 +38,6 @@ depends=(
r-stringr
r-txdb.hsapiens.ucsc.hg19.knowngene
r-txdb.hsapiens.ucsc.hg38.knowngene
- r-bsgenome.hsapiens.ucsc.hg38
)
optdepends=(
r-biocstyle
@@ -46,7 +47,7 @@ optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('2c8cbc5fe9f2883da696406c1338a51ccee77a348963560fbf7b247c4f7c1b64')
+sha256sums=('50236b7341e13938c818737ecc1e9fc8441c4d21387511a4362e743b2f2f56bb')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"