add r-universalmotif

2 files changed, 98 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..aa7ecca9baf3
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,41 @@
+pkgbase = r-universalmotif
+	pkgdesc = Import, Modify, and Export Motifs with R
+	pkgver = 1.14.1
+	pkgrel = 1
+	url = https://bioconductor.org/packages/universalmotif
+	arch = x86_64
+	license = GPL
+	depends = r
+	depends = r-biocgenerics
+	depends = r-biostrings
+	depends = r-ggplot2
+	depends = r-iranges
+	depends = r-rcpp
+	depends = r-rcppthread
+	depends = r-rlang
+	depends = r-s4vectors
+	depends = r-yaml
+	optdepends = r-ape
+	optdepends = r-biocparallel
+	optdepends = r-bookdown
+	optdepends = r-cowplot
+	optdepends = r-dplyr
+	optdepends = r-genomicranges
+	optdepends = r-ggbio
+	optdepends = r-ggseqlogo
+	optdepends = r-ggtree
+	optdepends = r-knitr
+	optdepends = r-motifdb
+	optdepends = r-motifstack
+	optdepends = r-processx
+	optdepends = r-pwmenrich
+	optdepends = r-rgadem
+	optdepends = r-rmarkdown
+	optdepends = r-seqlogo
+	optdepends = r-spelling
+	optdepends = r-testthat
+	optdepends = r-tfbstools
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/universalmotif_1.14.1.tar.gz
+	sha256sums = 59cb8b79673cc61637c6b1363fa9b47c330e21f33c05a52526a30cacd027a5ea
+
+pkgname = r-universalmotif
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..ed26583d469c
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,57 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=universalmotif
+_pkgver=1.14.1
+pkgname=r-${_pkgname,,}
+pkgver=1.14.1
+pkgrel=1
+pkgdesc='Import, Modify, and Export Motifs with R'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biocgenerics
+  r-biostrings
+  r-ggplot2
+  r-iranges
+  r-rcpp
+  r-rcppthread
+  r-rlang
+  r-s4vectors
+  r-yaml
+)
+optdepends=(
+  r-ape
+  r-biocparallel
+  r-bookdown
+  r-cowplot
+  r-dplyr
+  r-genomicranges
+  r-ggbio
+  r-ggseqlogo
+  r-ggtree
+  r-knitr
+  r-motifdb
+  r-motifstack
+  r-processx
+  r-pwmenrich
+  r-rgadem
+  r-rmarkdown
+  r-seqlogo
+  r-spelling
+  r-testthat
+  r-tfbstools
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('59cb8b79673cc61637c6b1363fa9b47c330e21f33c05a52526a30cacd027a5ea')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: