diff options
| author | Roberto Rossini | 2019-09-27 21:43:39 +0200 |
|---|---|---|
| committer | Roberto Rossini | 2019-09-27 21:43:39 +0200 |
| commit | 7d1f3d543df7fb6de6414cbac6ff3870076f598b (patch) | |
| tree | e942de276d364e5860c6634c624e01859022c07d | |
| download | aur-7d1f3d543df7fb6de6414cbac6ff3870076f598b.tar.gz | |
Initial import
| -rw-r--r-- | .SRCINFO | 18 | ||||
| -rw-r--r-- | .gitignore | 1 | ||||
| -rw-r--r-- | PKGBUILD | 52 |
3 files changed, 71 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..91c0575115b8 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,18 @@ +pkgbase = raxml-ng + pkgdesc = A phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion + pkgver = 0.9.0 + pkgrel = 1 + url = https://github.com/amkozlov/raxml-ng + arch = x86_64 + license = AGPL3 + makedepends = git + makedepends = cmake + makedepends = bison + makedepends = flex + makedepends = gmp + depends = gcc-libs + source = git+https://github.com/amkozlov/raxml-ng.git#commit=0a064e9a40f2e00828662795141659d946440c81 + sha256sums = SKIP + +pkgname = raxml-ng + diff --git a/.gitignore b/.gitignore new file mode 100644 index 000000000000..72e8ffc0db8a --- /dev/null +++ b/.gitignore @@ -0,0 +1 @@ +* diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..868b478b3469 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,52 @@ +# Maintainer: Roberto Rossini ("robymetallo") <roberto.rossini.9533@student.uu.se> + +pkgname=raxml-ng +pkgver=0.9.0 +_release=0a064e9a40f2e00828662795141659d946440c81 +pkgrel=1 +pkgdesc="A phylogenetic tree inference tool which uses maximum-likelihood (ML)\ + optimality criterion" + +url='https://github.com/amkozlov/raxml-ng' +arch=('x86_64') + +license=('AGPL3') + +depends=('gcc-libs') + +makedepends=('git' 'cmake' 'bison' 'flex' 'gmp') + +source=("git+https://github.com/amkozlov/$pkgname.git#commit=$_release") + +# source=("https://github.com/amkozlov/$pkgname/archive/$pkgver.tar.gz") +# sha256sums=('43b95ee1bddae0daee84644e9ee760a77f28bb16e2071e95cca79a30f39373e5') +sha256sums=('SKIP') + +prepare() { + cd $pkgname + + git submodule update --init --recursive + + mkdir build/ + cd build/ + + cmake .. +} + +build() { + cd $pkgname/build + + make +} + +check() { + cd $pkgname/bin + + ./$pkgname -v | grep -Pxq "RAxML-NG v\. 0\.9\.0 released on \d+\.\d+\.\d+ by The Exelixis Lab\." +} + +package() { + cd $pkgname + + install -Dm755 bin/$pkgname "$pkgdir/usr/bin/$pkgname" +} |