diff options
| author | Kuoi | 2022-08-28 23:09:48 +0100 |
|---|---|---|
| committer | Kuoi | 2022-08-28 23:09:48 +0100 |
| commit | dcd3763ed5f4fe11ead59f41c4d863bec11da7f2 (patch) | |
| tree | 7221a2fe529f5ab0cf7ec997ea2faf84fb5a68b8 | |
| download | aur-dcd3763ed5f4fe11ead59f41c4d863bec11da7f2.tar.gz | |
init
| -rw-r--r-- | .SRCINFO | 23 | ||||
| -rw-r--r-- | PKGBUILD | 31 |
2 files changed, 54 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..3170d2e93b13 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,23 @@ +pkgbase = raxml-ng-mpi + pkgdesc = A phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. https://doi.org/10.1093/bioinformatics/btz305 + pkgver = 1.1.0 + pkgrel = 18 + url = https://github.com/amkozlov/raxml-ng + arch = x86_64 + license = AGPL3 + makedepends = bison + makedepends = make + makedepends = cmake + makedepends = flex + makedepends = gmp + makedepends = gtest + makedepends = git + depends = gcc-libs + depends = openmpi + depends = cuda + provides = raxml-ng + conflicts = raxml-ng + source = git+https://github.com/amkozlov/raxml-ng.git#tag=1.1.0 + sha256sums = SKIP + +pkgname = raxml-ng-mpi diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..a01a79db501e --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,31 @@ +# Maintainer: Guoyi ("malcology") <guoyizhang@malacology.net> +# Contributor: Guoyi ("malcology") <guoyizhang@malacology.net> + +pkgname=raxml-ng-mpi +pkgver=1.1.0 +pkgrel=18 +pkgdesc="A phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. https://doi.org/10.1093/bioinformatics/btz305" +url='https://github.com/amkozlov/raxml-ng' +arch=('x86_64') +license=('AGPL3') +depends=('gcc-libs' 'openmpi' 'cuda') +makedepends=('bison' 'make' 'cmake' 'flex' 'gmp' 'gtest' 'git') +source=("git+https://github.com/amkozlov/raxml-ng.git#tag=${pkgver}") +sha256sums=('SKIP') +provides=('raxml-ng') +conflicts=('raxml-ng') +prepare(){ + cd ${srcdir}/raxml-ng + git submodule update --init --recursive +} +build(){ + cd "${srcdir}"/raxml-ng + mkdir -p build + cd build + cmake -DUSE_MPI=ON .. + make +} +package() { + cd ${srcdir}/raxml-ng/bin + install -Dm755 $pkgname "${pkgdir}/usr/bin/${pkgname}" +} |