Initial

3 files changed, 62 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..5d4f34aa4102
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,16 @@
+pkgbase = regtools-git
+	pkgdesc = Tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context
+	pkgver = 0.6.0.r0.9221a19
+	pkgrel = 1
+	url = https://github.com/griffithlab/regtools
+	arch = any
+	license = MIT
+	makedepends = git
+	makedepends = cmake
+	provides = regtools
+	conflicts = regtools
+	source = git+https://github.com/griffithlab/regtools.git
+	md5sums = SKIP
+
+pkgname = regtools-git
+
diff --git a/.gitignore b/.gitignore
new file mode 100644
index 000000000000..ad2929e5f8a0
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,2 @@
+*.tar.zst
+regtools/
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..7fc10d858d4f
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,44 @@
+# Maintainer: Lev Levitsky <levlev<at>mail.ru>
+pkgname=regtools-git
+pkgver=0.6.0.r0.9221a19
+pkgrel=1
+pkgdesc="Tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context"
+arch=('any')
+url="https://github.com/griffithlab/regtools"
+license=('MIT')
+groups=()
+depends=()
+makedepends=('git' 'cmake')
+provides=("${pkgname%-git}")
+conflicts=("${pkgname%-git}")
+replaces=()
+backup=()
+options=()
+install=
+source=('git+https://github.com/griffithlab/regtools.git')
+noextract=()
+md5sums=('SKIP')
+
+# Please refer to the 'USING VCS SOURCES' section of the PKGBUILD man page for
+# a description of each element in the source array.
+
+pkgver() {
+	cd "$srcdir/${pkgname%-git}"
+
+    # Git, tags available
+	printf "%s" "$(git describe --long | sed 's/\([^-]*-\)g/r\1/;s/-/./g')"
+}
+
+build() {
+	cd "$srcdir/${pkgname%-git}"
+    mkdir build
+    cd build
+	cmake ..
+	make
+}
+
+package() {
+	cd "$srcdir/${pkgname%-git}/build"
+    install -d "$pkgdir/usr/bin"
+	install "${pkgname%-git}" "$pkgdir/usr/bin/"
+}