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| author | Thiago L. A. Miller | 2018-08-31 03:18:14 -0300 |
|---|---|---|
| committer | Thiago L. A. Miller | 2018-08-31 03:22:37 -0300 |
| commit | 098aaca85b2c1cc4c3265169c329d8e95c7adafe (patch) | |
| tree | ac7c4df7fc80f26b7f0d4d3a46b83bf8b62c9436 | |
| parent | 62c947c3e118b967a386654ba9728b65083450e8 (diff) | |
| download | aur-098aaca85b2c1cc4c3265169c329d8e95c7adafe.tar.gz | |
Function prepare() is cleaner
| -rw-r--r-- | .SRCINFO | 2 | ||||
| -rw-r--r-- | PKGBUILD | 10 |
2 files changed, 6 insertions, 6 deletions
@@ -1,7 +1,7 @@ pkgbase = salmon pkgdesc = Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments pkgver = 0.11.3 - pkgrel = 1 + pkgrel = 2 url = https://combine-lab.github.io/salmon/ arch = x86_64 license = GPL @@ -1,7 +1,7 @@ # Maintainer: Thiago L. A. Miller <thiago_leisrael@hotmail.com> pkgname=salmon pkgver=0.11.3 -pkgrel=1 +pkgrel=2 pkgdesc="Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments" arch=('x86_64') url="https://combine-lab.github.io/$pkgname/" @@ -13,10 +13,10 @@ source=("$pkgname-$pkgver.tar.gz"::"https://github.com/COMBINE-lab/$pkgname/arch md5sums=('99e95233be7f8510bed5c4d0c46a5074') prepare() { - # Fix for now JEMalloc seg fault when using jemalloc package - # Force cmake to statically build JEMalloc from salmon's dev sources - cd "$pkgname-$pkgver" - sed -i '/^find_package(Jemalloc)/,/^endif()/s/\(.\+\)/#\1/' CMakeLists.txt + # Fix for now segmentation fault when using archlinux jemalloc package + # Force cmake to statically build jemalloc from salmon's dev sources + cd "$pkgname-$pkgver" + sed -i '/^find_package(Jemalloc)/ , /^endif()/ s/^/#/' CMakeLists.txt } build() { |