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authorThiago L. A. Miller2018-08-30 04:52:15 -0300
committerThiago L. A. Miller2018-08-30 19:13:12 -0300
commit54864b03c9368ed84d70e806aa3ab0a0b2981c0d (patch)
tree3a26fba9b079e1e2c64e95fa47c1d841dd125331
parent8c23b5194414a38d62162dcce8aaca10ccbd488c (diff)
downloadaur-54864b03c9368ed84d70e806aa3ab0a0b2981c0d.tar.gz
Move 'boost' to makedepends and include 'bzip2' 'intel-tbb' 'jemalloc' 'xz' into depends
-rw-r--r--.SRCINFO13
-rw-r--r--.gitignore1
-rw-r--r--PKGBUILD7
3 files changed, 14 insertions, 7 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 63596a8034e6..2fcd5affdebf 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,14 +1,19 @@
pkgbase = salmon
pkgdesc = Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments
pkgver = 0.11.2
- pkgrel = 1
+ pkgrel = 2
url = https://combine-lab.github.io/salmon/
arch = x86_64
license = GPL
+ makedepends = boost>=1.55
makedepends = cmake
- depends = boost-libs>=1.55
- source = https://github.com/COMBINE-lab/salmon/releases/download/v0.11.2/salmon-0.11.2-linux_x86_64.tar.gz
- md5sums = 116bc842f2da2b30f1c73581157ffc43
+ makedepends = unzip
+ depends = bzip2
+ depends = intel-tbb
+ depends = xz
+ options = !emptydirs
+ source = salmon-0.11.2.tar.gz::https://github.com/COMBINE-lab/salmon/archive/v0.11.2.tar.gz
+ md5sums = d81f083e71adc6d46a21ed14df624136
pkgname = salmon
diff --git a/.gitignore b/.gitignore
index e20245338b32..b8ca3f7cce11 100644
--- a/.gitignore
+++ b/.gitignore
@@ -2,3 +2,4 @@
*.tar.xz
/pkg/
/src/
+/build/
diff --git a/PKGBUILD b/PKGBUILD
index 7c2a3f4e086f..3297660358fb 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,13 +1,14 @@
# Maintainer: Thiago L. A. Miller <thiago_leisrael@hotmail.com>
pkgname=salmon
pkgver=0.11.2
-pkgrel=1
+pkgrel=2
pkgdesc="Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments"
arch=('x86_64')
url="https://combine-lab.github.io/$pkgname/"
license=('GPL')
-depends=('boost>=1.55' 'ca-certificates' 'unzip')
-makedepends=('cmake')
+depends=('bzip2' 'intel-tbb' 'jemalloc' 'xz')
+makedepends=('boost>=1.55' 'cmake' 'unzip')
+options=('!emptydirs')
source=("$pkgname-$pkgver.tar.gz"::"https://github.com/COMBINE-lab/$pkgname/archive/v$pkgver.tar.gz")
md5sums=('d81f083e71adc6d46a21ed14df624136')