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authorPhilipp A2018-03-03 14:00:15 +0100
committerPhilipp A2018-04-05 12:23:53 +0200
commitd3dbea3d559e190c8cb31b72f231ff49e7a47e44 (patch)
tree2fd438f1d4e2cb1660d35f4a07e4af13072b3429
parent2af659d09400350a42343e42986eb274f4555400 (diff)
downloadaur-d3dbea3d559e190c8cb31b72f231ff49e7a47e44.tar.gz
v1.0.1
-rw-r--r--.SRCINFO29
-rw-r--r--PKGBUILD32
2 files changed, 26 insertions, 35 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 4e4bb7312b5c..43af6d17e8d0 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,32 +1,29 @@
pkgbase = scanpy
pkgdesc = Single-Cell Analysis in Python
- pkgver = 0.4.4
+ pkgver = 1.0.1
pkgrel = 1
url = https://github.com/theislab/scanpy
- arch = x86_64
- license = GPL3
- depends = cython
- depends = python-anndata>=0.5
+ arch = any
+ license = BSD
+ depends = python-anndata>=0.5.8
+ depends = python-matplotlib>=2.2
depends = python-pandas>=0.21
- depends = python-scikit-learn>=0.19.1
depends = python-scipy
- depends = python-statsmodels
- depends = python-matplotlib
depends = python-seaborn
- depends = python-psutil
- depends = python-xlrd
depends = python-h5py
+ depends = python-pytables
+ depends = python-scikit-learn>=0.19.1
+ depends = python-statsmodels
depends = python-networkx
- depends = python-louvain-igraph
depends = python-natsort
depends = python-joblib
- depends = python-profilehooks
- optdepends = python-umap-learn: UMAP dimension reduction
+ depends = python-numba
+ optdepends = python-multicoretsne
provides = scanpy
provides = python-scanpy
- noextract = scanpy-0.4.4-cp36-cp36m-manylinux1_x86_64.whl
- source = https://files.pythonhosted.org/packages/cp36/s/scanpy/scanpy-0.4.4-cp36-cp36m-manylinux1_x86_64.whl
- sha256sums = c89b8c05c321f6e75997c6ff8172159fe773cc10bdf1fcb9c8c09596eb1aecf9
+ noextract = scanpy-1.0.1-py3-none-any.whl
+ source = https://files.pythonhosted.org/packages/py3/s/scanpy/scanpy-1.0.1-py3-none-any.whl
+ sha256sums = 34eac67035c33f3f392f615fe53622261a613b44d657364973a51a2c947fc94f
pkgname = scanpy
diff --git a/PKGBUILD b/PKGBUILD
index 846ca8cdb9ba..80f55ef52442 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,37 +1,31 @@
# Maintainer: Phil Schaf <flying-sheep@web.de>
pkgname=scanpy
-pkgver=0.4.4
+pkgver=1.0.1
pkgrel=1
pkgdesc='Single-Cell Analysis in Python'
-arch=(x86_64)
+arch=(any)
provides=(scanpy python-scanpy)
url='https://github.com/theislab/scanpy'
-license=(GPL3)
+license=(BSD)
depends=(
- cython
- 'python-anndata>=0.5'
+ 'python-anndata>=0.5.8'
+ 'python-matplotlib>=2.2'
'python-pandas>=0.21'
- 'python-scikit-learn>=0.19.1'
python-scipy
- python-statsmodels
- python-matplotlib
python-seaborn
- python-psutil
- python-xlrd
python-h5py
+ python-pytables
+ 'python-scikit-learn>=0.19.1'
+ python-statsmodels
python-networkx
- python-louvain-igraph
python-natsort
python-joblib
- python-profilehooks
-)
-optdepends=(
- 'python-umap-learn: UMAP dimension reduction'
-)
-_wheel="$pkgname-$pkgver-cp36-cp36m-manylinux1_x86_64.whl"
-source=("https://files.pythonhosted.org/packages/cp36/${pkgname::1}/$pkgname/$_wheel")
-sha256sums=('c89b8c05c321f6e75997c6ff8172159fe773cc10bdf1fcb9c8c09596eb1aecf9')
+ python-numba)
+optdepends=(python-multicoretsne)
+_wheel="$pkgname-$pkgver-py3-none-any.whl"
+source=("https://files.pythonhosted.org/packages/py3/${pkgname::1}/$pkgname/$_wheel")
+sha256sums=('34eac67035c33f3f392f615fe53622261a613b44d657364973a51a2c947fc94f')
noextract=("$_wheel")
package() {