summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorBioArchLinuxBot2023-02-27 12:02:11 +0000
committerBioArchLinuxBot2023-02-27 12:02:11 +0000
commit77b26f0c3f6451a5624d9f4315a999d4eb1c3dd0 (patch)
tree818b5b397e9ce438cc2e1b0a9d5d0dac1c1d1f27
parent13faaf805dcfb5b17cf7ebaf7cdf7fecf74ae19c (diff)
downloadaur-77b26f0c3f6451a5624d9f4315a999d4eb1c3dd0.tar.gz
[lilac] updated to 2.4.13f-1
-rw-r--r--.SRCINFO6
-rw-r--r--PKGBUILD8
-rw-r--r--spaln.csh2
-rw-r--r--spaln.sh2
4 files changed, 9 insertions, 9 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 1770a68064d6..336e1182935a 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -4,7 +4,7 @@ pkgbase = spaln
pkgrel = 1
url = https://github.com/ogotoh/spaln
arch = x86_64
- license = GPL3
+ license = GPL2
depends = zlib
depends = perl
source = spaln-2.4.13f.tar.gz::https://github.com/ogotoh/spaln/archive/refs/tags/ver.2.4.13f.tar.gz
@@ -12,8 +12,8 @@ pkgbase = spaln
source = spaln.csh
source = destdir.patch
sha256sums = 024fdcf58e38373983092280a7e10ff9c7e246e7d2465c165e158512e686225e
- sha256sums = 16e205ed8baf72052d6bce8a758eaae73e29d2469bd6825c6374dc652a5c165c
- sha256sums = 8529a45783eee4f9e0c668e8ef670ab95cf02fb60059d5e442b0283d60a83e7c
+ sha256sums = 9a0b4fa808ab2d88d277cbe5d49b6ed02eff768c45409cba70d4132230ca676d
+ sha256sums = 9b77f3a31dd260703a8cefc6416794fc0ddb04999cd5078be9c5a287664561d1
sha256sums = b78d8bf6c79cee8aa0a06e5aa61098041d46a468275fda911883d356866f8a8f
pkgname = spaln
diff --git a/PKGBUILD b/PKGBUILD
index 64df65dfbc7c..cff9e4e0829b 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -6,15 +6,15 @@ pkgrel=1
pkgdesc='Splicing-aware transcript (cDNA/EST or protein sequences) alignment to genomic DNA'
arch=('x86_64')
url='https://github.com/ogotoh/spaln'
-license=('GPL3')
+license=('GPL2')
depends=('zlib' 'perl')
source=("${pkgname}-${pkgver}.tar.gz::https://github.com/ogotoh/spaln/archive/refs/tags/ver.${pkgver}.tar.gz"
"spaln.sh"
"spaln.csh"
"destdir.patch")
sha256sums=('024fdcf58e38373983092280a7e10ff9c7e246e7d2465c165e158512e686225e'
- '16e205ed8baf72052d6bce8a758eaae73e29d2469bd6825c6374dc652a5c165c'
- '8529a45783eee4f9e0c668e8ef670ab95cf02fb60059d5e442b0283d60a83e7c'
+ '9a0b4fa808ab2d88d277cbe5d49b6ed02eff768c45409cba70d4132230ca676d'
+ '9b77f3a31dd260703a8cefc6416794fc0ddb04999cd5078be9c5a287664561d1'
'b78d8bf6c79cee8aa0a06e5aa61098041d46a468275fda911883d356866f8a8f')
prepare() {
@@ -28,7 +28,7 @@ prepare() {
build() {
cd ${pkgname}-ver.${pkgver}/src
- make
+ make -j1
}
package() {
diff --git a/spaln.csh b/spaln.csh
index 3876f99de483..0b7309811baf 100644
--- a/spaln.csh
+++ b/spaln.csh
@@ -3,4 +3,4 @@
# tables install to /usr/share/spaln/table
setenv ALN_TAB /usr/share/spaln/table
# alndbs install to /usr/share/spaln/seqdb
-setenv ALN_DBS /usr/share/spaln/seqdb \ No newline at end of file
+setenv ALN_DBS /usr/share/spaln/seqdb
diff --git a/spaln.sh b/spaln.sh
index e7ea9141fe99..0fb4d2f5b2c7 100644
--- a/spaln.sh
+++ b/spaln.sh
@@ -3,4 +3,4 @@
# tables install to /usr/share/spaln/table
export ALN_TAB=/usr/share/spaln/table
# alndbs install to /usr/share/spaln/seqdb
-export ALN_DBS=/usr/share/spaln/seqdb \ No newline at end of file
+export ALN_DBS=/usr/share/spaln/seqdb