summarylogtreecommitdiffstats
diff options
context:
space:
mode:
authorapolih2016-03-20 14:44:31 -0500
committerapolih2016-03-20 14:44:31 -0500
commitca23d40fd6c06bf5086ed32bd496ea02ad2bde05 (patch)
tree7feef41e90842654381aa7ccfcc38a6800f93660
parent42fce0d305257071d3e49d540a80e90f8372e858 (diff)
downloadaur-ca23d40fd6c06bf5086ed32bd496ea02ad2bde05.tar.gz
updated to 2.5.8
-rw-r--r--.SRCINFO8
-rw-r--r--PKGBUILD6
2 files changed, 6 insertions, 8 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 847de0b6a055..1b789560c2f3 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,8 +1,6 @@
-# Generated by mksrcinfo v8
-# Fri Jan 29 22:50:27 UTC 2016
pkgbase = sra-tools
pkgdesc = The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.
- pkgver = 2.5.7
+ pkgver = 2.5.8
pkgrel = 1
url = http://www.ncbi.nlm.nih.gov/Traces/sra/
arch = x86_64
@@ -14,8 +12,8 @@ pkgbase = sra-tools
depends = ncbi-vdb
optdepends = fuse: mount remote genome reference files
provides = sra-tools
- source = sra-tools-2.5.7.tar.gz::https://github.com/ncbi/sra-tools/archive/2.5.7.tar.gz
- sha256sums = 854a23da7ca49026adf4ca7adee65e9387389d6a55568c403be87442cec32361
+ source = sra-tools-2.5.8.tar.gz::https://github.com/ncbi/sra-tools/archive/2.5.8.tar.gz
+ sha256sums = 7527585226fd1255cc662209309e4aebf38136082034ba25e1d79506bdfb8a57
pkgname = sra-tools
diff --git a/PKGBUILD b/PKGBUILD
index 47e94bcebac3..6903115f39f7 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
# Maintainer: Aaron Baker <aa{last name}99{at}gmail{dt}org>
pkgname=sra-tools
-pkgver=2.5.7
+pkgver=2.5.8
pkgrel=1
pkgdesc="The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives."
arch=('x86_64')
@@ -12,7 +12,7 @@ optdepends=('fuse: mount remote genome reference files')
provides=('sra-tools')
license=('custom:PublicDomain')
source=("$pkgname-$pkgver.tar.gz::https://github.com/ncbi/sra-tools/archive/$pkgver.tar.gz")
-sha256sums=('854a23da7ca49026adf4ca7adee65e9387389d6a55568c403be87442cec32361')
+sha256sums=('7527585226fd1255cc662209309e4aebf38136082034ba25e1d79506bdfb8a57')
prepare(){
cd $pkgname-$pkgver
@@ -24,7 +24,7 @@ prepare(){
build(){
cd "${pkgname}-${pkgver}"
- ./configure --prefix="$pkgdir/usr/" --with-ngs-sdk-prefix=/usr --with-ncbi-vdb-sources="/usr/src/ncbi-vdb-2.5.7"
+ ./configure --prefix="$pkgdir/usr/" --with-ngs-sdk-prefix=/usr --with-ncbi-vdb-sources="/usr/src/ncbi-vdb-$pkgver"
make
}