diff options
| author | mschubert | 2015-06-12 12:07:01 +0100 |
|---|---|---|
| committer | mschubert | 2015-06-12 12:07:01 +0100 |
| commit | 8fc7dba32425b422cebc633952725cade5fb1306 (patch) | |
| tree | a612fa4012a3b55d2ff2f3ff6006403cce4766ce | |
| download | aur-8fc7dba32425b422cebc633952725cade5fb1306.tar.gz | |
Initial import
| -rw-r--r-- | .SRCINFO | 19 | ||||
| -rw-r--r-- | PKGBUILD | 36 |
2 files changed, 55 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..331966c10b5a --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,19 @@ +pkgbase = staden + pkgdesc = Tools for DNA sequence assembly (Gap4/5), editing and analysis (Spin) + pkgver = 2.0.0b10 + pkgrel = 1 + url = http://staden.sourceforge.net/ + arch = i686 + arch = x86_64 + license = BSD + depends = staden-io_lib + depends = tklib + optdepends = iwidgets: gap5 prefinish + optdepends = xz: better gap5 compression + optdepends = libpng: gap5 Report Mutations + options = !emptydirs + source = http://sourceforge.net/projects/staden/files/staden/2.0.0b10/staden-2.0.0b10-src.tar.gz + md5sums = 81ad0b840253774e41d3089fca7af688 + +pkgname = staden + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..0946d43526af --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,36 @@ +# Maintainer: Michael Schubert <mschu.dev at gmail> +# Contributor: Stunts <f.pinamartins@gmail.com> +# Contributor: LoneWolf <lonewolf@xs4all.nl> + +pkgname=staden +pkgver=2.0.0b10 +pkgrel=1 +pkgdesc="Tools for DNA sequence assembly (Gap4/5), editing and analysis (Spin)" +arch=('i686' 'x86_64') +url="http://staden.sourceforge.net/" +license=('BSD') +depends=('staden-io_lib' 'tklib') +optdepends=('iwidgets: gap5 prefinish' 'xz: better gap5 compression' +'libpng: gap5 Report Mutations') +source=("http://sourceforge.net/projects/staden/files/$pkgname/$pkgver/$pkgname-$pkgver-src.tar.gz") +options=('!emptydirs') +md5sums=('81ad0b840253774e41d3089fca7af688') + +prepare() { + cd "$srcdir/$pkgname-$pkgver-src/" + sed -i 's:-DSVN_VERSION=$(SVNVERS)::' system.mk.in + sed -i 's:/usr/local/tklib:/usr/lib/tklib0.5:g' configure + sed -i 's:png_ptr->jmpbuf:png_jmpbuf(png_ptr):' tk_utils/tkTrace.c + sed -i "s/gzFile\ \*gz/gzFile\ gz/" gap5/zfio.h +} + +build() { + cd "$srcdir/$pkgname-$pkgver-src/" + ./configure --prefix=/usr + make +} + +package() { + cd "$srcdir/$pkgname-$pkgver-src/" + make DESTDIR="$pkgdir" install +} |