Version upgrade

1 files changed, 10 insertions, 9 deletions

diff --git a/PKGBUILD b/PKGBUILD
index 1d87d2c38106..bf2deb3b82ad 100755
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,6 +1,6 @@
 # Maintainer: Nigel Michki <nigeil@yahoo.com>
 pkgname=star-seq-alignment
-pkgver=v2.5.3a
+pkgver=2.7.1a
 pkgrel=1
 pkgdesc="An RNA-seq alignment suite, by Alexander Dobin"
 arch=('i686' 
@@ -13,23 +13,24 @@ depends=()
 makedepends=('wget'
              'gcc')
 optdepends=()
-source=('https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz')
-md5sums=('baf8d1b62a50482cfa13acb7652dc391')
+source=('https://github.com/alexdobin/STAR/archive/2.7.1a.tar.gz')
+md5sums=(SKIP)
 
 prepare() {
-  msg2 "Downloading files"
-  wget $source
+#  msg2 "Downloading files"
+#  cd $srcdir
+#  wget $source
   msg2 "Decompressing files"
-  tar -xzvf $srcdir/2.5.3a.tar.gz
+  tar -xzvf $pkgver.tar.gz -C $srcdir/
 }
 
 build() {
-  cd $srcdir/STAR-2.5.3a/source
-  make STAR
+  cd $srcdir/STAR-$pkgver/source
+  make LDFLAGSextra=-flto CXXFLAGSextra="-flto -march=native" -j 20 STAR
 }
 
 package() {
   mkdir $pkgdir/usr
   mkdir $pkgdir/usr/bin
-  cp $srcdir/STAR-2.5.3a/source/STAR $pkgdir/usr/bin/star-seq-alignment
+  cp $srcdir/STAR-$pkgver/source/STAR $pkgdir/usr/bin/star-seq-alignment
 }