upload depen

2 files changed, 38 insertions, 8 deletions

diff --git a/.SRCINFO b/.SRCINFO
index f58e711866c7..b64c35cf45f4 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -5,14 +5,41 @@ pkgbase = ugene-bin
 	url = http://ugene.net
 	arch = x86_64
 	license = GPL
-	depends = qt5-script
-	depends = qt5-svg
-	depends = qt5-webkit
+	depends = libxtst
 	depends = glu
-	depends = procps-ng
-	depends = python
+	depends = qt5-webkit
+	depends = qt5-websockets
+	depends = qt5-svg
+	depends = qt5-script
+	depends = desktop-file-utils
+	depends = qspec-git
+	optdepends = cufflinks
+	optdepends = bowtie
+	optdepends = clustalw
+	optdepends = phyml
+	optdepends = blast+
+	optdepends = clustal-omega
+	optdepends = vcftools
+	optdepends = mrbayes
+	optdepends = bwa
+	optdepends = bedtools
+	optdepends = tcoffee
+	optdepends = hmmer
+	optdepends = snpeff
+	optdepends = samtools
+	optdepends = mafft
+	optdepends = trimmomatic
+	optdepends = stringtie
+	optdepends = kraken
+	optdepends = diamond-aligner
+	optdepends = python2-cutadapt
+	optdepends = python
+	optdepends = java-runtime
+	optdepends = bowtie2
+	optdepends = tophat
+	optdepends = fastqc
 	provides = ugene
-	conflicts = ugene
+	conflicts = ugene-git
 	source = https://github.com/ugeneunipro/ugene/releases/download/39.0/ugene-39.0-linux-x86-64.tar.gz
 	source = ugene.desktop
 	source = ugene.svg
diff --git a/PKGBUILD b/PKGBUILD
index 6ca2aa81af29..ccc229b14647 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -8,9 +8,12 @@ pkgdesc="A free cross-platform genome analysis suite (binary release)"
 arch=('x86_64')
 url="http://ugene.net"
 license=('GPL')
-depends=('qt5-script' 'qt5-svg' 'qt5-webkit' 'glu' 'procps-ng' 'python')
+depends=('libxtst' 'glu' 'qt5-webkit' 'qt5-websockets' 'qt5-svg' 'qt5-script' 'desktop-file-utils' 'qspec-git')
+optdepends=('cufflinks' 'bowtie' 'clustalw' 'phyml' 'blast+' 'clustal-omega' 'vcftools' 'mrbayes' 'bwa' 'bedtools'
+	'tcoffee' 'hmmer' 'snpeff' 'samtools' 'mafft' 'trimmomatic' 'stringtie' 'kraken' 'diamond-aligner'
+	'python2-cutadapt' 'python' 'java-runtime' 'bowtie2' 'tophat' 'fastqc')
 provides=('ugene')
-conflicts=('ugene')
+conflicts=('ugene-git')
 source=("https://github.com/ugeneunipro/ugene/releases/download/${pkgver}/ugene-${pkgver}-linux-x86-64.tar.gz" "ugene.desktop" "ugene.svg")
 sha256sums=('f04fcfdf62703e9feba2fd6fd3b74b19cf676c65d312d0d3b08f5622dc2081cf'
             '58aeee982faa07913c016323cdded0a4022695c4e313954fdc09c36742013896'