diff options
| author | PumpkinCheshire | 2022-01-26 10:13:21 +0800 |
|---|---|---|
| committer | PumpkinCheshire | 2022-01-26 10:13:21 +0800 |
| commit | 53b11514515cd907c542058ed89a70e70fd363f1 (patch) | |
| tree | f9145593f048c9c495ab546fdee468f5843fb834 | |
| parent | 924ab389cefa98b146e219d7d4f119f2ad14cbe0 (diff) | |
| download | aur-unicycler.tar.gz | |
bump to 0.5.0
| -rw-r--r-- | .SRCINFO | 6 | ||||
| -rw-r--r-- | PKGBUILD | 25 |
2 files changed, 19 insertions, 12 deletions
@@ -1,6 +1,6 @@ pkgbase = unicycler pkgdesc = Hybrid assembly pipeline for bacterial genomes. - pkgver = 0.4.9 + pkgver = 0.5.0 pkgrel = 1 url = https://github.com/rrwick/Unicycler/ arch = any @@ -14,7 +14,7 @@ pkgbase = unicycler optdepends = samtools: polishing optdepends = bowtie2: polishing optdepends = blast+: rotating circular contigs - source = https://github.com/rrwick/Unicycler//archive/refs/tags/v0.4.9.tar.gz - b2sums = abb4da1c1b1795b9eae6edcde875c63e196070a53882ef42b3ece25806f0811c9c934438ede8a912af4ce04bd57a94d39dc9edd12b0ceef01b9d61af953638f8 + source = https://github.com/rrwick/Unicycler//archive/refs/tags/v0.5.0.tar.gz + b2sums = 7e333d2e7b855e2c914ea8488c9f81626eb3a3c9d884bbab7196598416c824c23e3eb27cb9ac3001ec82dc7576fc44558055b86fe3d3c6bdf5d8afaf2592236d pkgname = unicycler @@ -1,32 +1,39 @@ -# Maintainer: PumpkinCheshire <sollyonzou at gmail dot com> +#!/bin/bash + +# Maintainer: PumpkinCheshire <me at pumpkincheshire dot com> pkgname=unicycler _name=Unicycler -pkgver=0.4.9 +pkgver=0.5.0 pkgrel=1 pkgdesc="Hybrid assembly pipeline for bacterial genomes." arch=('any') url="https://github.com/rrwick/Unicycler/" license=('GPL') -makedepends=('gcc' 'clang' - 'python-setuptools') -optdepends=('spades: short read or hybird assembly' +makedepends=( + 'gcc' + 'clang' + 'python-setuptools' +) +optdepends=( + 'spades: short read or hybird assembly' 'racon: long-read or hybrid assembly' 'pilon: polishing' 'samtools: polishing' 'bowtie2: polishing' - 'blast+: rotating circular contigs') + 'blast+: rotating circular contigs' +) source=("$url/archive/refs/tags/v$pkgver.tar.gz") -b2sums=('abb4da1c1b1795b9eae6edcde875c63e196070a53882ef42b3ece25806f0811c9c934438ede8a912af4ce04bd57a94d39dc9edd12b0ceef01b9d61af953638f8') +b2sums=('7e333d2e7b855e2c914ea8488c9f81626eb3a3c9d884bbab7196598416c824c23e3eb27cb9ac3001ec82dc7576fc44558055b86fe3d3c6bdf5d8afaf2592236d') build() { - cd "$srcdir/$_name-$pkgver" + cd "$srcdir/$_name-$pkgver" || exit export PYTHONHASHSEED=0 python setup.py build } package() { - cd "$srcdir/$_name-$pkgver" + cd "$srcdir/$_name-$pkgver" || exit python setup.py install --root="$pkgdir" --optimize=1 --skip-build install -Dm644 LICENSE -t "$pkgdir/usr/share/licenses/$pkgname" } |