diff options
| author | Drobot Viktor | 2018-11-05 22:46:08 +0300 |
|---|---|---|
| committer | Drobot Viktor | 2018-11-05 22:46:08 +0300 |
| commit | 4a8e3dbd0e95a5d01d0ec0ec225738411ed66bec (patch) | |
| tree | d50f4644ad7f39dd50e39761dc56ac4cac9f4321 | |
| download | aur-4a8e3dbd0e95a5d01d0ec0ec225738411ed66bec.tar.gz | |
Initial release
| -rw-r--r-- | .SRCINFO | 20 | ||||
| -rw-r--r-- | LICENSE | 34 | ||||
| -rw-r--r-- | PKGBUILD | 44 | ||||
| -rw-r--r-- | plugins.patch | 40 |
4 files changed, 138 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..8847ddaedb9e --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,20 @@ +pkgbase = vmd-molfile-plugins + pkgdesc = Visual Molecular Dynamics plugins package + pkgver = 1.9.3 + pkgrel = 1 + url = https://www.ks.uiuc.edu/Research/vmd/plugins + arch = x86_64 + license = custom + makedepends = make + makedepends = gcc + depends = tcl + depends = netcdf + source = local://vmd-1.9.3.src.tar.gz + source = plugins.patch + source = LICENSE + md5sums = 5706f88b9b77cc5fafda6fef3a82d6fa + md5sums = b79218662efe472ad2844f3b5b9beff6 + md5sums = f60d4d3f9c39c0e9e997a6eacacbade1 + +pkgname = vmd-molfile-plugins + diff --git a/LICENSE b/LICENSE new file mode 100644 index 000000000000..48a65301a394 --- /dev/null +++ b/LICENSE @@ -0,0 +1,34 @@ +University of Illinois Open Source License +Copyright 2006 Theoretical and Computational Biophysics Group, +All rights reserved. + +Developed by: Theoretical and Computational Biophysics Group + University of Illinois at Urbana-Champaign + http://www.ks.uiuc.edu/ + +Permission is hereby granted, free of charge, to any person obtaining a copy of +this software and associated documentation files (the Software), to deal with +the Software without restriction, including without limitation the rights to +use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies +of the Software, and to permit persons to whom the Software is furnished to +do so, subject to the following conditions: + +Redistributions of source code must retain the above copyright notice, +this list of conditions and the following disclaimers. + +Redistributions in binary form must reproduce the above copyright notice, +this list of conditions and the following disclaimers in the documentation +and/or other materials provided with the distribution. + +Neither the names of Theoretical and Computational Biophysics Group, +University of Illinois at Urbana-Champaign, nor the names of its contributors +may be used to endorse or promote products derived from this Software without +specific prior written permission. + +THE SOFTWARE IS PROVIDED AS IS, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL +THE CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR +OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, +ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR +OTHER DEALINGS WITH THE SOFTWARE. diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..d26a874d1245 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,44 @@ +# Maintainer: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com +pkgname=vmd-molfile-plugins +pkgver=1.9.3 +pkgrel=1 +pkgdesc="Visual Molecular Dynamics plugins package" +url="https://www.ks.uiuc.edu/Research/vmd/plugins" +license=('custom') +arch=('x86_64') +depends=('tcl' 'netcdf') +makedepends=('make' 'gcc') +md5sums=('5706f88b9b77cc5fafda6fef3a82d6fa' + 'b79218662efe472ad2844f3b5b9beff6' + 'f60d4d3f9c39c0e9e997a6eacacbade1') + +# You should download the source package from the VMD site and put it in the PKGBUILD folder +source=("local://vmd-${pkgver}.src.tar.gz" + "plugins.patch" + "LICENSE") + +prepare() { + cd ${srcdir}/plugins + + patch -Np0 -i "${srcdir}/plugins.patch" +} + +build() { + cd ${srcdir}/plugins + + make LINUXAMD64 +} + +package() { + cd ${srcdir}/plugins + + PLUGINDIR=${srcdir}/molfile make distrib + + install -d ${pkgdir}/usr/lib/${pkgname} + install -Dm755 ${srcdir}/molfile/LINUXAMD64/molfile/*.so ${pkgdir}/usr/lib/${pkgname} + install -Dm644 ${srcdir}/molfile/LINUXAMD64/molfile/libmolfile_plugin* ${pkgdir}/usr/lib/${pkgname} + install -d ${pkgdir}/usr/include/vmd-molfile + install -Dm644 ${srcdir}/molfile/include/*.h ${pkgdir}/usr/include/vmd-molfile + install -Dm644 ${srcdir}/LICENSE ${pkgdir}/usr/share/licenses/${pkgname}/LICENSE +} + diff --git a/plugins.patch b/plugins.patch new file mode 100644 index 000000000000..178d3299d850 --- /dev/null +++ b/plugins.patch @@ -0,0 +1,40 @@ +--- Makefile 2016-07-13 22:24:24.000000000 +0300 ++++ Makefile 2018-11-05 21:27:03.157083651 +0300 +@@ -22,7 +22,7 @@ + + # When building from the independent multiseq tree, we'll use an empty list + # since the dependency will be dealt with manually. +-#MSEQBUILDDIRS = ++MSEQBUILDDIRS = + + # The Intersurf plugin is compiled manually and should only be + # listed if the binaries are up-to-date for the target platform(s) +@@ -146,7 +146,7 @@ + @echo "Populating distribution directory with compiled plugins" + -mkdir -p $(PLUGINDIR)/include + for header in $(PLUGINHEADERS); do cp -p $(INCLUDEDIR)/$$header $(PLUGINDIR)/include || exit 1 ; done +- for dir in molfile_plugin $(BUILDDIRS); do cd $$dir && $(MAKE) distrib && cd .. || exit 1 ; done ++ for dir in molfile_plugin; do cd $$dir && $(MAKE) distrib && cd .. || exit 1 ; done + + include Make-arch + +--- Make-arch 2016-10-22 00:34:39.000000000 +0300 ++++ Make-arch 2018-11-05 21:02:19.862302589 +0300 +@@ -333,7 +333,7 @@ + "SHLD = gcc -shared" + + LINUXAMD64: +- $(MAKE) dynlibs staticlibs bins \ ++ $(MAKE) dynlibs staticlibs \ + "ARCH = LINUXAMD64" \ + "COPTO = -fPIC -m64 -o " \ + "LOPTO = -fPIC -m64 -lstdc++ -o " \ +@@ -342,7 +342,7 @@ + "DEF = -D" \ + "CCFLAGS = -m64 -O2 -fPIC -Wall" \ + "CXXFLAGS = -m64 -O2 -fPIC -Wall" \ +- "TCLLDFLAGS = -ltcl8.5 -ldl" \ ++ "TCLLDFLAGS = -ltcl8.6 -ldl" \ + "NETCDFLDFLAGS = -lnetcdf " \ + "AR = ar" \ + "NM = nm -p" \ |