add r-sojourner

2 files changed, 94 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..79032e4b7d16
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,39 @@
+pkgbase = r-sojourner
+	pkgdesc = Statistical analysis of single molecule trajectories
+	pkgver = 1.10.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/sojourner
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-dplyr
+	depends = r-ebimage
+	depends = r-fitdistrplus
+	depends = r-ggplot2
+	depends = r-gridextra
+	depends = r-mclust
+	depends = r-minpack.lm
+	depends = r-mixtools
+	depends = r-mltools
+	depends = r-nls2
+	depends = r-pixmap
+	depends = r-plyr
+	depends = r-r.matlab
+	depends = r-rcpp
+	depends = r-reshape2
+	depends = r-rlang
+	depends = r-sampsurf
+	depends = r-scales
+	depends = r-shiny
+	depends = r-shinyjs
+	depends = r-sp
+	depends = r-truncnorm
+	optdepends = r-biocgenerics
+	optdepends = r-biocstyle
+	optdepends = r-knitr
+	optdepends = r-rmarkdown
+	optdepends = r-runit
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/sojourner_1.10.0.tar.gz
+	sha256sums = 8baadc0b80177bc303842116e3eb4cecb2ed07b50a1a4a0d91b8372f2138efa5
+
+pkgname = r-sojourner
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..3c4f25380c81
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,55 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=sojourner
+_pkgver=1.10.0
+pkgname=r-${_pkgname,,}
+pkgver=1.10.0
+pkgrel=1
+pkgdesc='Statistical analysis of single molecule trajectories'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-dplyr
+  r-ebimage
+  r-fitdistrplus
+  r-ggplot2
+  r-gridextra
+  r-mclust
+  r-minpack.lm
+  r-mixtools
+  r-mltools
+  r-nls2
+  r-pixmap
+  r-plyr
+  r-r.matlab
+  r-rcpp
+  r-reshape2
+  r-rlang
+  r-sampsurf
+  r-scales
+  r-shiny
+  r-shinyjs
+  r-sp
+  r-truncnorm
+)
+optdepends=(
+  r-biocgenerics
+  r-biocstyle
+  r-knitr
+  r-rmarkdown
+  r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('8baadc0b80177bc303842116e3eb4cecb2ed07b50a1a4a0d91b8372f2138efa5')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: