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author | GoliathLabs | 2020-06-28 17:37:22 +0200 |
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committer | GoliathLabs | 2020-06-28 17:37:22 +0200 |
commit | 1f948d90f1dc5f98182df0b84115c13bfbdf9bb6 (patch) | |
tree | 88d04b9f09ad4d4ab52796336cda686fd872c093 | |
parent | c87e2d4feab7c52c4e1c05ddbfa73826d7eaa144 (diff) | |
download | aur-1f948d90f1dc5f98182df0b84115c13bfbdf9bb6.tar.gz |
Updated: 1.12.0
-rw-r--r-- | .SRCINFO | 10 | ||||
-rw-r--r-- | PKGBUILD | 70 | ||||
-rw-r--r-- | hdf5-1.12.0-compat-1.6.patch | 89 |
3 files changed, 137 insertions, 32 deletions
@@ -1,16 +1,20 @@ pkgbase = lib32-hdf5 pkgdesc = General purpose library and file format for storing scientific data (32-bit) - pkgver = 1.10.4 + pkgver = 1.12.0 pkgrel = 1 url = https://portal.hdfgroup.org/display/support arch = x86_64 license = custom + makedepends = cmake makedepends = time makedepends = gcc-fortran-multilib depends = lib32-zlib depends = lib32-libaec - source = https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.4/src/hdf5-1.10.4.tar.bz2 - md5sums = 886148d0cc9ffd3c8e1fce0bd75ed07b + depends = bash + source = https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.12/hdf5-1.12.0/src/hdf5-1.12.0.tar.bz2 + source = hdf5-1.12.0-compat-1.6.patch + sha256sums = 97906268640a6e9ce0cde703d5a71c9ac3092eded729591279bf2e3ca9765f61 + sha256sums = 72ad497c56760bb3af8193c88d3fa264125829850b843697de55d934c56f7f44 pkgname = lib32-hdf5 @@ -1,27 +1,40 @@ -# Maintainer : George Eleftheriou <eleftg> +# Maintainer: +# Contributor: Felix Golatofski <contact@xdfr.de> +# Contributor: George Eleftheriou <eleftg> # Contributor: orumin <dev at orum.in> _pkgname=hdf5 pkgname=lib32-${_pkgname} -pkgver=1.10.4 +pkgver=1.12.0 pkgrel=1 pkgdesc="General purpose library and file format for storing scientific data (32-bit)" arch=('x86_64') url="https://portal.hdfgroup.org/display/support" -license=('custom') -depends=('lib32-zlib' 'lib32-libaec') -makedepends=('time' 'gcc-fortran-multilib') -source=("https://support.hdfgroup.org/ftp/HDF5/releases/${_pkgname}-${pkgver:0:4}/${_pkgname}-${pkgver}/src/${_pkgname}-${pkgver}.tar.bz2") -md5sums=('886148d0cc9ffd3c8e1fce0bd75ed07b') - -prepare() { - mkdir -p build -} +license=(custom) +depends=(lib32-zlib lib32-libaec bash) +makedepends=(cmake time gcc-fortran-multilib) +source=("https://support.hdfgroup.org/ftp/HDF5/releases/${_pkgname}-${pkgver:0:4}/${_pkgname}-${pkgver}/src/${_pkgname}-${pkgver}.tar.bz2" + hdf5-1.12.0-compat-1.6.patch) +sha256sums=('97906268640a6e9ce0cde703d5a71c9ac3092eded729591279bf2e3ca9765f61' + '72ad497c56760bb3af8193c88d3fa264125829850b843697de55d934c56f7f44') build() { - cd build + # Crazy workaround: run CMake to generate pkg-config file + mkdir -p build && cd build + cmake ../${_pkgname}-${pkgver/_/-} \ + -DCMAKE_INSTALL_PREFIX=/usr \ + -DBUILD_SHARED_LIBS=ON \ + -DCMAKE_BUILD_TYPE=Release \ + -DHDF5_BUILD_HL_LIB=ON \ + -DHDF5_BUILD_CPP_LIB=ON \ + -DHDF5_BUILD_FORTRAN=ON \ + -DHDF5_ENABLE_Z_LIB_SUPPORT=ON \ + -DHDF5_ENABLE_SZIP_SUPPORT=ON \ + -DHDF5_ENABLE_SZIP_ENCODING=ON + # But dont build with it, its quite broken - "${srcdir}/${_pkgname}-${pkgver}"/configure \ + cd ${srcdir}/${_pkgname}-${pkgver} + ./configure \ CFLAGS="-m32 ${CFLAGS}" \ CXXFLAGS="-m32 ${CXXFLAGS}" \ FCFLAGS="-m32 ${FCFLAGS}" \ @@ -40,29 +53,28 @@ build() { --with-pic \ --with-zlib \ --with-szlib - make } check() { - cd build - - # Without exporting LD_LIBRARY_PATH, tests fail being unable to - # locate the newly built (not installed yet) hdf5 runtime - export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${srcdir}/build/src/.libs" - export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${srcdir}/build/c++/src/.libs" - export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${srcdir}/build/fortran/src/.libs" - export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${srcdir}/build/hl/src/.libs" - export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${srcdir}/build/hl/c++/src/.libs" - export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:${srcdir}/build/hl/fortran/src/.libs" - + cd ${_pkgname}-${pkgver/_/-} + # Without this, checks are failing with messages like error while loading shared libraries: libhdf5.so.101: cannot open shared object file: No such file or directory + export LD_LIBRARY_PATH="${srcdir}"/${pkgname}-${pkgver/_/-}/src/.libs/ + export LD_LIBRARY_PATH="$LD_LIBRARY_PATH":"${srcdir}"/${pkgname}-${pkgver/_/-}/c++/src/.libs/ + export LD_LIBRARY_PATH="$LD_LIBRARY_PATH":"${srcdir}"/${pkgname}-${pkgver/_/-}/fortran/src/.libs/ + export LD_LIBRARY_PATH="$LD_LIBRARY_PATH":"${srcdir}"/${pkgname}-${pkgver/_/-}/hl/src/.libs/ + export LD_LIBRARY_PATH="$LD_LIBRARY_PATH":"${srcdir}"/${pkgname}-${pkgver/_/-}/hl/c++/src/.libs/ + export LD_LIBRARY_PATH="$LD_LIBRARY_PATH":"${srcdir}"/${pkgname}-${pkgver/_/-}/hl/fortran/src/.libs/ make check } package() { - cd build - + cd ${_pkgname}-${pkgver/_/-} make DESTDIR="${pkgdir}" install - - rm -rf "${pkgdir}"/usr/{include,share,bin} + install -Dm644 COPYING -t "${pkgdir}"/usr/share/licenses/${_pkgname} + # Install pkg-config files from CMake tree + install -Dm644 ../build/CMakeFiles/hdf5{,_hl}{,_cpp}-${pkgver}.pc -t "${pkgdir}"/usr/lib/pkgconfig/ + # Fix 1.6 compatibility for h5py + cd "${pkgdir}"/usr/include/ + patch -p1 -i "${srcdir}"/hdf5-1.12.0-compat-1.6.patch } diff --git a/hdf5-1.12.0-compat-1.6.patch b/hdf5-1.12.0-compat-1.6.patch new file mode 100644 index 000000000000..eda1919dc94b --- /dev/null +++ b/hdf5-1.12.0-compat-1.6.patch @@ -0,0 +1,89 @@ +--- a/H5version.h ++++ b/H5version.h +@@ -97,6 +97,10 @@ + #define H5Ewalk_vers 1 + #endif /* !defined(H5Ewalk_vers) */ + ++#if !defined(H5Fget_info_vers) ++ #define H5Fget_info_vers 1 ++#endif /* !defined(H5Fget_info_vers) */ ++ + #if !defined(H5Gcreate_vers) + #define H5Gcreate_vers 1 + #endif /* !defined(H5Gcreate_vers) */ +@@ -105,6 +109,38 @@ + #define H5Gopen_vers 1 + #endif /* !defined(H5Gopen_vers) */ + ++#if !defined(H5Lget_info_vers) ++ #define H5Lget_info_vers 1 ++#endif /* !defined(H5Lget_info_vers) */ ++ ++#if !defined(H5Lget_info_by_idx_vers) ++ #define H5Lget_info_by_idx_vers 1 ++#endif /* !defined(H5Lget_info_by_idx_vers) */ ++ ++#if !defined(H5Oget_info_vers) ++ #define H5Oget_info_vers 1 ++#endif /* !defined(H5Oget_info_vers) */ ++ ++#if !defined(H5Oget_info_by_idx_vers) ++ #define H5Oget_info_by_idx_vers 1 ++#endif /* !defined(H5Oget_info_by_idx_vers) */ ++ ++#if !defined(H5Oget_info_by_name_vers) ++ #define H5Oget_info_by_name_vers 1 ++#endif /* !defined(H5Oget_info_by_name_vers) */ ++ ++#if !defined(H5Ovisit_vers) ++ #define H5Ovisit_vers 1 ++#endif /* !defined(H5Ovisit_vers) */ ++ ++#if !defined(H5Ovisit_by_name_vers) ++ #define H5Ovisit_by_name_vers 1 ++#endif /* !defined(H5Ovisit_by_name_vers) */ ++ ++#if !defined(H5Pencode_vers) ++ #define H5Pencode_vers 1 ++#endif /* !defined(H5Pencode_vers) */ ++ + #if !defined(H5Pget_filter_vers) + #define H5Pget_filter_vers 1 + #endif /* !defined(H5Pget_filter_vers) */ +@@ -133,6 +169,10 @@ + #define H5Tarray_create_vers 1 + #endif /* !defined(H5Tarray_create_vers) */ + ++#if !defined(H5Sencode_vers) ++ #define H5Sencode_vers 1 ++#endif /* !defined(H5Sencode_vers) */ ++ + #if !defined(H5Tcommit_vers) + #define H5Tcommit_vers 1 + #endif /* !defined(H5Tcommit_vers) */ +@@ -153,6 +193,14 @@ + #define H5E_auto_t_vers 1 + #endif /* !defined(H5E_auto_t_vers) */ + ++#if !defined(H5O_info_t_vers) ++ #define H5O_info_t_vers 1 ++#endif /* !defined(H5O_info_t_vers) */ ++ ++#if !defined(H5O_iterate_t_vers) ++ #define H5O_iterate_t_vers 1 ++#endif /* !defined(H5O_iterate_t_vers) */ ++ + #if !defined(H5Z_class_t_vers) + #define H5Z_class_t_vers 1 + #endif /* !defined(H5Z_class_t_vers) */ +@@ -261,6 +309,10 @@ + #define H5Ovisit_by_name_vers 1 + #endif /* !defined(H5Ovisit_by_name_vers) */ + ++#if !defined(H5Pencode_vers) ++ #define H5Pencode_vers 1 ++#endif /* !defined(H5Pencode_vers) */ ++ + #if !defined(H5Pget_filter_vers) + #define H5Pget_filter_vers 2 + #endif /* !defined(H5Pget_filter_vers) */ |