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| author | Sukanka | 2022-06-06 14:36:40 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 14:36:40 +0800 |
| commit | 2c658ea616ed834eea5cd34be689dbaac9b936ca (patch) | |
| tree | 94c4099dc1f160378d227ce9a35e72d11ddd92c9 | |
| download | aur-2c658ea616ed834eea5cd34be689dbaac9b936ca.tar.gz | |
add r-mapkl
| -rw-r--r-- | .SRCINFO | 28 | ||||
| -rw-r--r-- | PKGBUILD | 44 |
2 files changed, 72 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..015e7381b2e9 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,28 @@ +pkgbase = r-mapkl + pkgdesc = A Hybrid Feature Selection method for gene expression data + pkgver = 1.26.0 + pkgrel = 1 + url = https://bioconductor.org/packages/mAPKL + arch = any + license = GPL + depends = r + depends = r-annotationdbi + depends = r-apcluster + depends = r-biobase + depends = r-clustersim + depends = r-e1071 + depends = r-igraph + depends = r-limma + depends = r-multtest + depends = r-parmigene + depends = r-reactome.db + optdepends = r-biocgenerics + optdepends = r-biocstyle + optdepends = r-hgu133plus2.db + optdepends = r-knitr + optdepends = r-mapkldata + optdepends = r-runit + source = https://bioconductor.org/packages/release/bioc/src/contrib/mAPKL_1.26.0.tar.gz + sha256sums = 3a5c0145990bfe4174cdd27c137c614060402fea120cc3429de645ad256fee7f + +pkgname = r-mapkl diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..2702e97fd0cb --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,44 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=mAPKL +_pkgver=1.26.0 +pkgname=r-${_pkgname,,} +pkgver=1.26.0 +pkgrel=1 +pkgdesc='A Hybrid Feature Selection method for gene expression data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-annotationdbi + r-apcluster + r-biobase + r-clustersim + r-e1071 + r-igraph + r-limma + r-multtest + r-parmigene + r-reactome.db +) +optdepends=( + r-biocgenerics + r-biocstyle + r-hgu133plus2.db + r-knitr + r-mapkldata + r-runit +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('3a5c0145990bfe4174cdd27c137c614060402fea120cc3429de645ad256fee7f') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |