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authorChristoph Fink2022-04-29 12:41:24 +0300
committerChristoph Fink2022-04-29 12:41:24 +0300
commit51f514863154382fd63d302cc0312fe27f4e2c2b (patch)
tree1ef531649a95ce2cdfed8f3f735e69cb15da7133
parent8843956ae05ace94cca191f66c29f33f7162217c (diff)
downloadaur-51f514863154382fd63d302cc0312fe27f4e2c2b.tar.gz
upgpkg: r-biobase 2.56.0-1
upstream release upstream release
-rw-r--r--.SRCINFO6
-rw-r--r--PKGBUILD12
2 files changed, 11 insertions, 7 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 885c9ddf2916..ef78272ccd8a 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = r-biobase
pkgdesc = Biobase: Base functions for Bioconductor
- pkgver = 2.54.0
+ pkgver = 2.56.0
pkgrel = 1
url = https://bioconductor.org/packages/release/bioc/html/Biobase.html
arch = i686
@@ -12,7 +12,7 @@ pkgbase = r-biobase
optdepends = r-all
optdepends = r-runit
optdepends = r-golubesets
- source = https://bioconductor.org/packages/release/bioc/src/contrib/Biobase_2.54.0.tar.gz
- sha256sums = 9c3fa69a195ff3001c3614df6b3995a8064083919dfdb4fba1e57aa5de14594d
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/Biobase_2.56.0.tar.gz
+ sha256sums = 7b49f4336b1b9323b02b6819ff3bb8347e47e696ec0802cc4d0758858e9fddd6
pkgname = r-biobase
diff --git a/PKGBUILD b/PKGBUILD
index 9c58cd8f9d4d..6ac47bf8b519 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,8 +1,9 @@
+# Maintiner: peippo <christoph+aur@christophfink.com>
# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=Biobase
-_bcver=2.54.0
+_bcver=2.56.0
pkgname=r-${_bcname,,}
pkgver=${_bcver//[:-]/.}
pkgrel=1
@@ -10,10 +11,10 @@ pkgdesc="Biobase: Base functions for Bioconductor"
arch=(i686 x86_64)
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
license=(Artistic-2.0)
-depends=('r>=2.10' 'r-biocgenerics>=0.27.1')
+depends=("r>=2.10" "r-biocgenerics>=0.27.1")
optdepends=(r-tkwidgets r-all r-runit r-golubesets)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
-sha256sums=('9c3fa69a195ff3001c3614df6b3995a8064083919dfdb4fba1e57aa5de14594d')
+sha256sums=("7b49f4336b1b9323b02b6819ff3bb8347e47e696ec0802cc4d0758858e9fddd6")
build(){
R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}"
@@ -21,6 +22,9 @@ build(){
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
-
cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
+
+ if [[ -f "${_cranname}/LICENSE" ]]; then
+ install -Dm0644 "${_cranname}/LICENSE" "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
+ fi
}