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author | Sukanka | 2022-06-06 08:27:56 +0800 |
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committer | Sukanka | 2022-06-06 08:27:56 +0800 |
commit | 5cf7a3bd820671acc0fed3c7ef034f3172da8409 (patch) | |
tree | c589ae3669594b1535fd6c6f1d714adadf9f6d0e | |
download | aur-5cf7a3bd820671acc0fed3c7ef034f3172da8409.tar.gz |
add r-doppelgangr
-rw-r--r-- | .SRCINFO | 24 | ||||
-rw-r--r-- | PKGBUILD | 40 |
2 files changed, 64 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..7f5ff47813b4 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,24 @@ +pkgbase = r-doppelgangr + pkgdesc = Identify likely duplicate samples from genomic or meta-data + pkgver = 1.24.0 + pkgrel = 1 + url = https://bioconductor.org/packages/doppelgangR + arch = any + license = GPL + depends = r + depends = r-biobase + depends = r-biocparallel + depends = r-digest + depends = r-impute + depends = r-mnormt + depends = r-summarizedexperiment + depends = r-sva + optdepends = r-biocstyle + optdepends = r-curatedovariandata + optdepends = r-knitr + optdepends = r-rmarkdown + optdepends = r-testthat + source = https://bioconductor.org/packages/release/bioc/src/contrib/doppelgangR_1.24.0.tar.gz + sha256sums = ed9be20878c5f01cf9415cd8830900c00ae71198178966338fbc4d07daecc006 + +pkgname = r-doppelgangr diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..49c9b5a332a1 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,40 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=doppelgangR +_pkgver=1.24.0 +pkgname=r-${_pkgname,,} +pkgver=1.24.0 +pkgrel=1 +pkgdesc='Identify likely duplicate samples from genomic or meta-data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biobase + r-biocparallel + r-digest + r-impute + r-mnormt + r-summarizedexperiment + r-sva +) +optdepends=( + r-biocstyle + r-curatedovariandata + r-knitr + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('ed9be20878c5f01cf9415cd8830900c00ae71198178966338fbc4d07daecc006') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |