add r-annotationforge

2 files changed, 86 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..f0bec43a09dc
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,35 @@
+pkgbase = r-annotationforge
+	pkgdesc = Tools for building SQLite-based annotation data packages
+	pkgver = 1.38.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/AnnotationForge
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-annotationdbi
+	depends = r-biobase
+	depends = r-biocgenerics
+	depends = r-dbi
+	depends = r-rcurl
+	depends = r-rsqlite
+	depends = r-s4vectors
+	depends = r-xml
+	optdepends = r-affy
+	optdepends = r-biocfilecache
+	optdepends = r-biocmanager
+	optdepends = r-biocstyle
+	optdepends = r-biomart
+	optdepends = r-biostrings
+	optdepends = r-genomeinfodb
+	optdepends = r-go.db
+	optdepends = r-hgu95av2.db
+	optdepends = r-homo.sapiens
+	optdepends = r-httr
+	optdepends = r-human.db0
+	optdepends = r-knitr
+	optdepends = r-markdown
+	optdepends = r-org.hs.eg.db
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/AnnotationForge_1.38.0.tar.gz
+	sha256sums = e8fffd592a364e0154c255964cbfd198b6f6f6b227c83ca4f4efa9d69b722ca3
+
+pkgname = r-annotationforge
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..2c9f9c029056
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,51 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=AnnotationForge
+_pkgver=1.38.0
+pkgname=r-${_pkgname,,}
+pkgver=1.38.0
+pkgrel=1
+pkgdesc='Tools for building SQLite-based annotation data packages'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-annotationdbi
+  r-biobase
+  r-biocgenerics
+  r-dbi
+  r-rcurl
+  r-rsqlite
+  r-s4vectors
+  r-xml
+)
+optdepends=(
+  r-affy
+  r-biocfilecache
+  r-biocmanager
+  r-biocstyle
+  r-biomart
+  r-biostrings
+  r-genomeinfodb
+  r-go.db
+  r-hgu95av2.db
+  r-homo.sapiens
+  r-httr
+  r-human.db0
+  r-knitr
+  r-markdown
+  r-org.hs.eg.db
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('e8fffd592a364e0154c255964cbfd198b6f6f6b227c83ca4f4efa9d69b722ca3')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: