upgpkg: 5.13.0-1

2 files changed, 40 insertions, 39 deletions

diff --git a/.SRCINFO b/.SRCINFO
index 31b1b665cfd9..7ce3b7cb3414 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
 pkgbase = python-pymc
 	pkgdesc = Markov chain Monte Carlo for Python
-	pkgver = 5.11.0
+	pkgver = 5.13.0
 	pkgrel = 1
 	url = https://github.com/pymc-devs/pymc
 	arch = any
@@ -14,7 +14,7 @@ pkgbase = python-pymc
 	depends = python-arviz
 	depends = python-cachetools
 	depends = python-cloudpickle
-	depends = python-fastprogress
+	depends = python-dm-tree
 	depends = python-graphviz
 	depends = python-matplotlib
 	depends = python-networkx
@@ -22,10 +22,11 @@ pkgbase = python-pymc
 	depends = python-pandas
 	depends = python-pytensor
 	depends = python-pytest
+	depends = python-rich
 	depends = python-scipy
 	depends = python-typing_extensions
 	depends = python-xarray
-	source = python-pymc-5.11.0.tar.gz::https://github.com/pymc-devs/pymc/archive/v5.11.0.tar.gz
-	sha256sums = 96d137933542cfd133154956969625d40780f9e29ad00904c206170490fac2b5
+	source = python-pymc-5.13.0.tar.gz::https://github.com/pymc-devs/pymc/archive/v5.13.0.tar.gz
+	sha256sums = d13c19af88fba30d8647b9bfd01f271f5a6576f5e496aeb1ea11b5e32431316d
 
 pkgname = python-pymc
diff --git a/PKGBUILD b/PKGBUILD
index c32b6a3dcd25..270b0cc2c27a 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
-# Maintainer: Carl Smedstad <carl.smedstad at protonmail dot com>
+# Maintainer: Carl Smedstad <carsme@archlinux.org>
 # Contributor: xia0er <xia0er@gmail.com>
 
 pkgname=python-pymc
 _pkgname=${pkgname#python-}
-pkgver=5.11.0
+pkgver=5.13.0
 pkgrel=1
 pkgdesc="Markov chain Monte Carlo for Python"
 arch=(any)
@@ -15,7 +15,7 @@ depends=(
   python-arviz
   python-cachetools
   python-cloudpickle
-  python-fastprogress
+  python-dm-tree # Missing dep to python-arviz
   python-graphviz
   python-matplotlib
   python-networkx
@@ -23,6 +23,7 @@ depends=(
   python-pandas
   python-pytensor
   python-pytest
+  python-rich
   python-scipy
   python-typing_extensions
   python-xarray
@@ -34,7 +35,7 @@ makedepends=(
   python-wheel
 )
 source=("$pkgname-$pkgver.tar.gz::$url/archive/v$pkgver.tar.gz")
-sha256sums=('96d137933542cfd133154956969625d40780f9e29ad00904c206170490fac2b5')
+sha256sums=('d13c19af88fba30d8647b9bfd01f271f5a6576f5e496aeb1ea11b5e32431316d')
 
 _archive="$_pkgname-$pkgver"
 
@@ -47,7 +48,7 @@ build() {
 check() {
   cd "$_archive"
 
-  local ignore_test_args=(
+  local pytest_args=(
     # Requires https://github.com/pyro-ppl/numpyro which is not yet packaged.
     --ignore=tests/sampling/test_jax.py
     --ignore=tests/sampling/test_mcmc_external.py
@@ -59,35 +60,6 @@ check() {
     # Error during test collection.
     --ignore=tests/backends/test_mcbackend.py
 
-    # Most time-consuming test files, ignore these to make test duration more
-    # reasonable.
-    --ignore=tests/backends/test_arviz.py
-    --ignore=tests/distributions/test_continuous.py
-    --ignore=tests/distributions/test_discrete.py
-    --ignore=tests/distributions/test_distribution.py
-    --ignore=tests/distributions/test_mixture.py
-    --ignore=tests/distributions/test_multivariate.py
-    --ignore=tests/distributions/test_timeseries.py
-    --ignore=tests/distributions/test_transform.py
-    --ignore=tests/distributions/test_truncated.py
-    --ignore=tests/gp/test_cov.py
-    --ignore=tests/gp/test_gp.py
-    --ignore=tests/gp/test_hsgp_approx.py
-    --ignore=tests/logprob/test_mixture.py
-    --ignore=tests/logprob/test_tensor.py
-    --ignore=tests/logprob/test_transforms.py
-    --ignore=tests/model/test_core.py
-    --ignore=tests/sampling/test_forward.py
-    --ignore=tests/sampling/test_mcmc.py
-    --ignore=tests/sampling/test_parallel.py
-    --ignore=tests/step_methods/hmc/test_nuts.py
-    --ignore=tests/step_methods/test_metropolis.py
-    --ignore=tests/test_func_utils.py
-    --ignore=tests/test_math.py
-    --ignore=tests/test_pytensorf.py
-    --ignore=tests/variational/test_inference.py
-  )
-  local deselect_test_args=(
     # Fails due to:
     # DeprecationWarning: np.find_common_type is deprecated.  Please use `np.result_type` or `np.promote_types`.
     --deselect=tests/backends/test_arviz.py::TestDataPyMC::test_autodetect_coords_from_model
@@ -107,8 +79,36 @@ check() {
     # Fails due to:
     # assert array(nan) >= 0
     --deselect=tests/distributions/test_multivariate.py::TestMatchesScipy::test_multinomial_zero_probs
+
+    # Most time-consuming test files, ignore these to make test duration more
+    # reasonable.
+    --deselect=tests/backends/test_arviz.py
+    --deselect=tests/distributions/test_continuous.py
+    --deselect=tests/distributions/test_discrete.py
+    --deselect=tests/distributions/test_distribution.py
+    --deselect=tests/distributions/test_mixture.py
+    --deselect=tests/distributions/test_multivariate.py
+    --deselect=tests/distributions/test_timeseries.py
+    --deselect=tests/distributions/test_transform.py
+    --deselect=tests/distributions/test_truncated.py
+    --deselect=tests/gp/test_cov.py
+    --deselect=tests/gp/test_gp.py
+    --deselect=tests/gp/test_hsgp_approx.py
+    --deselect=tests/logprob/test_mixture.py
+    --deselect=tests/logprob/test_tensor.py
+    --deselect=tests/logprob/test_transforms.py
+    --deselect=tests/model/test_core.py
+    --deselect=tests/sampling/test_forward.py
+    --deselect=tests/sampling/test_mcmc.py
+    --deselect=tests/sampling/test_parallel.py
+    --deselect=tests/step_methods/hmc/test_nuts.py
+    --deselect=tests/step_methods/test_metropolis.py
+    --deselect=tests/test_func_utils.py
+    --deselect=tests/test_math.py
+    --deselect=tests/test_pytensorf.py
+    --deselect=tests/variational/test_inference.py
   )
-  pytest "${ignore_test_args[@]}" "${deselecte_test_args[@]}"
+  pytest "${pytest_args[@]}"
 }
 
 package() {