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| author | Christian Krause | 2015-10-01 16:03:54 +0200 |
|---|---|---|
| committer | Christian Krause | 2015-10-01 16:03:54 +0200 |
| commit | 80af243f377cb9d7af89d5bdd2b50765a6cb0474 (patch) | |
| tree | e581fafb219c8a64d062ee755a5436d2fe5fdc92 | |
| parent | de91adfb0ee91b0faf4292a0dd70d66a02ab896e (diff) | |
| download | aur-80af243f377cb9d7af89d5bdd2b50765a6cb0474.tar.gz | |
tophat-2.1.0-3
| -rw-r--r-- | .SRCINFO | 4 | ||||
| -rw-r--r-- | PKGBUILD | 10 |
2 files changed, 10 insertions, 4 deletions
@@ -1,7 +1,7 @@ pkgbase = tophat pkgdesc = fast splice junction mapper for RNA-Seq reads pkgver = 2.1.0 - pkgrel = 2 + pkgrel = 3 url = http://ccb.jhu.edu/software/tophat/index.shtml arch = x86_64 arch = i686 @@ -13,7 +13,7 @@ pkgbase = tophat source = http://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.0.tar.gz source = https://github.com/seqan/seqan/archive/seqan-v1.4.2.tar.gz source = fix_build_w_seqan1.4.patch - md5sums = 1ace6e96fa692af6ed885bad5fe7c4d7 + md5sums = 34afa379b030c6672a31bbe3689745bc md5sums = 7b0080b01feeb223e054dabef53d6fc5 md5sums = 93d47e54408b7b5eb4132d65f5dd5085 @@ -2,7 +2,7 @@ pkgname=tophat pkgver=2.1.0 -pkgrel=2 +pkgrel=3 pkgdesc="fast splice junction mapper for RNA-Seq reads" arch=('x86_64' 'i686') url="http://ccb.jhu.edu/software/tophat/index.shtml" @@ -12,7 +12,7 @@ makedepends=('boost') source=("http://ccb.jhu.edu/software/tophat/downloads/tophat-$pkgver.tar.gz" 'https://github.com/seqan/seqan/archive/seqan-v1.4.2.tar.gz' 'fix_build_w_seqan1.4.patch') -md5sums=('1ace6e96fa692af6ed885bad5fe7c4d7' +md5sums=('34afa379b030c6672a31bbe3689745bc' '7b0080b01feeb223e054dabef53d6fc5' '93d47e54408b7b5eb4132d65f5dd5085') @@ -62,5 +62,11 @@ package() { make DESTDIR=$pkgdir install + # fix python install + install -d $pkgdir/usr/lib/python2.7/site-packages + mv \ + -t $pkgdir/usr/lib/python2.7/site-packages \ + $pkgdir/usr/bin/{intervaltree,sortedcontainers} + install -Dm644 LICENSE $pkgdir/usr/share/licenses/$pkgname/LICENSE } |