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authorSukanka2022-06-06 15:36:49 +0800
committerSukanka2022-06-06 15:36:49 +0800
commit822d8156ff4ed2f84686644c6aac8bb105d845d4 (patch)
tree7c8926cdde0586fda8f96b355eb0f7941ecb37fb
downloadaur-822d8156ff4ed2f84686644c6aac8bb105d845d4.tar.gz
add r-microbiomeprofiler
-rw-r--r--.SRCINFO26
-rw-r--r--PKGBUILD42
2 files changed, 68 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..d48ba25064ee
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,26 @@
+pkgbase = r-microbiomeprofiler
+ pkgdesc = An R/shiny package for microbiome functional enrichment analysis
+ pkgver = 1.2.0
+ pkgrel = 1
+ url = https://bioconductor.org/packages/MicrobiomeProfiler
+ arch = any
+ license = GPL
+ depends = r
+ depends = r-clusterprofiler
+ depends = r-config
+ depends = r-dt
+ depends = r-enrichplot
+ depends = r-ggplot2
+ depends = r-golem
+ depends = r-htmltools
+ depends = r-magrittr
+ depends = r-shiny
+ depends = r-shinycustomloader
+ depends = r-shinywidgets
+ optdepends = r-knitr
+ optdepends = r-rmarkdown
+ optdepends = r-testthat
+ source = https://bioconductor.org/packages/release/bioc/src/contrib/MicrobiomeProfiler_1.2.0.tar.gz
+ sha256sums = 8908b675eaec3d7066e257c2c936e4647efd648f14fb22e1eca12f4c038af433
+
+pkgname = r-microbiomeprofiler
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..22c528f6def6
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,42 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=MicrobiomeProfiler
+_pkgver=1.2.0
+pkgname=r-${_pkgname,,}
+pkgver=1.2.0
+pkgrel=1
+pkgdesc='An R/shiny package for microbiome functional enrichment analysis'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+ r
+ r-clusterprofiler
+ r-config
+ r-dt
+ r-enrichplot
+ r-ggplot2
+ r-golem
+ r-htmltools
+ r-magrittr
+ r-shiny
+ r-shinycustomloader
+ r-shinywidgets
+)
+optdepends=(
+ r-knitr
+ r-rmarkdown
+ r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('8908b675eaec3d7066e257c2c936e4647efd648f14fb22e1eca12f4c038af433')
+
+build() {
+ R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: