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authorclintval2018-01-29 14:00:46 -0800
committerclintval2018-01-29 14:00:46 -0800
commit84967f3fbc28ef3079bf5bbfc4dbb5eecf30b4a8 (patch)
treed794cc39c3c7d184fd5a9dcb30b7a12ba89fb3bd
downloadaur-84967f3fbc28ef3079bf5bbfc4dbb5eecf30b4a8.tar.gz
First commit with PKGBUILD and .SRCINFO
-rw-r--r--.SRCINFO25
-rw-r--r--PKGBUILD45
2 files changed, 70 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..8c31511c0607
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,25 @@
+pkgbase = python-cyvcf2
+ pkgdesc = Fast VCF/BCF processor in Python using Cython and htslib
+ pkgver = 0.8.6
+ pkgrel = 1
+ url = https://pypi.python.org/pypi/cyvcf2
+ arch = any
+ license = MIT
+ makedepends = python
+ makedepends = python-setuptools
+ makedepends = python2
+ makedepends = python2-setuptools
+ options = !emptydirs
+ source = python-cyvcf2-0.8.6.tar.gz::https://pypi.python.org/packages/39/c9/b2b5d29b945e5599cddc0f04aa10e7f50e45d80a32cf22aa639d0b3a201b/cyvcf2-0.8.6.tar.gz
+ sha256sums = eca706d5c94786fe94c27839772f16d0e1b04de6569857ef2180035f6d07b03d
+
+pkgname = python-cyvcf2
+ depends = python
+ depends = python-numpy
+ depends = htslib
+
+pkgname = python2-cyvcf2
+ depends = python2
+ depends = python2-numpy
+ depends = htslib
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..f8be28a018b4
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,45 @@
+# Maintainer: Clint Valentine <valentine.clint@gmail.com>
+
+_name=cyvcf2
+pkgbase='python-cyvcf2'
+pkgname=('python-cyvcf2' 'python2-cyvcf2')
+pkgver=0.8.6
+pkgrel=1
+pkgdesc="Fast VCF/BCF processor in Python using Cython and htslib"
+arch=('any')
+url=https://pypi.python.org/pypi/"${_name}"
+license=('MIT')
+makedepends=(
+ 'python' 'python-setuptools'
+ 'python2' 'python2-setuptools')
+options=(!emptydirs)
+source=("${pkgname}"-"${pkgver}".tar.gz::https://pypi.python.org/packages/39/c9/b2b5d29b945e5599cddc0f04aa10e7f50e45d80a32cf22aa639d0b3a201b/cyvcf2-0.8.6.tar.gz)
+sha256sums=('eca706d5c94786fe94c27839772f16d0e1b04de6569857ef2180035f6d07b03d')
+
+prepare() {
+ cp -a "${_name}"-"${pkgver}"{,-py2}
+}
+
+build(){
+ cd "${srcdir}"/"${_name}"-"${pkgver}"
+ python setup.py build
+
+ cd "${srcdir}"/"${_name}"-"${pkgver}"-py2
+ python2 setup.py build
+}
+
+package_python2-cyvcf2() {
+ depends=('python2' 'python2-numpy' 'htslib')
+
+ cd "${_name}"-"${pkgver}"-py2
+ python2 setup.py install --root="${pkgdir}"/ --optimize=1 --skip-build
+ install -Dm644 LICENSE "${pkgdir}"/usr/share/licenses/"${pkgname}"/LICENSE
+}
+
+package_python-cyvcf2() {
+ depends=('python' 'python-numpy' 'htslib')
+
+ cd "${_name}"-"${pkgver}"
+ python setup.py install --root="${pkgdir}"/ --optimize=1 --skip-build
+ install -Dm644 LICENSE "${pkgdir}"/usr/share/licenses/"${pkgname}"/LICENSE
+}