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author | Sukanka | 2022-06-06 01:26:37 +0800 |
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committer | Sukanka | 2022-06-06 01:26:37 +0800 |
commit | 884f91fc62b21481df51ea483e8cac21fc403ee9 (patch) | |
tree | 1cd674da3ab51d3996805c0be700a8200edebfde | |
download | aur-884f91fc62b21481df51ea483e8cac21fc403ee9.tar.gz |
add r-alphabeta
-rw-r--r-- | .SRCINFO | 24 | ||||
-rw-r--r-- | PKGBUILD | 40 |
2 files changed, 64 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..3aed830cb756 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,24 @@ +pkgbase = r-alphabeta + pkgdesc = Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants + pkgver = 1.10.0 + pkgrel = 1 + url = https://bioconductor.org/packages/AlphaBeta + arch = any + license = GPL + depends = r + depends = r-biocparallel + depends = r-data.table + depends = r-dplyr + depends = r-expm + depends = r-ggplot2 + depends = r-gtools + depends = r-igraph + depends = r-optimx + depends = r-plotly + depends = r-stringr + optdepends = r-knitr + optdepends = r-rmarkdown + source = https://bioconductor.org/packages/release/bioc/src/contrib/AlphaBeta_1.10.0.tar.gz + sha256sums = 4fc5d4241edbb6ecb13d7ca675ed3cade2a8e54a88e5f70cb54f00555fcc6dc6 + +pkgname = r-alphabeta diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..2583ba5de909 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,40 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=AlphaBeta +_pkgver=1.10.0 +pkgname=r-${_pkgname,,} +pkgver=1.10.0 +pkgrel=1 +pkgdesc='Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocparallel + r-data.table + r-dplyr + r-expm + r-ggplot2 + r-gtools + r-igraph + r-optimx + r-plotly + r-stringr +) +optdepends=( + r-knitr + r-rmarkdown +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('4fc5d4241edbb6ecb13d7ca675ed3cade2a8e54a88e5f70cb54f00555fcc6dc6') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |