add r-msqrob2

2 files changed, 80 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..196734da27d2
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,32 @@
+pkgbase = r-msqrob2
+	pkgdesc = Robust statistical inference for quantitative LC-MS proteomics
+	pkgver = 1.4.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/msqrob2
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-biocparallel
+	depends = r-limma
+	depends = r-lme4
+	depends = r-purrr
+	depends = r-qfeatures
+	depends = r-summarizedexperiment
+	optdepends = r-biocstyle
+	optdepends = r-gridextra
+	optdepends = r-knitr
+	optdepends = r-matrixstats
+	optdepends = r-mscoreutils
+	optdepends = r-msdata
+	optdepends = r-msnbase
+	optdepends = r-multcomp
+	optdepends = r-plotly
+	optdepends = r-refmanager
+	optdepends = r-rmarkdown
+	optdepends = r-sessioninfo
+	optdepends = r-testthat
+	optdepends = r-tidyverse
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/msqrob2_1.4.0.tar.gz
+	sha256sums = 3c00b46f0e3950dd6cba7c6eb74d85db8f7f1eca050a4732f8b7567b6fac4300
+
+pkgname = r-msqrob2
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..35e091604718
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,48 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=msqrob2
+_pkgver=1.4.0
+pkgname=r-${_pkgname,,}
+pkgver=1.4.0
+pkgrel=1
+pkgdesc='Robust statistical inference for quantitative LC-MS proteomics'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-biocparallel
+  r-limma
+  r-lme4
+  r-purrr
+  r-qfeatures
+  r-summarizedexperiment
+)
+optdepends=(
+  r-biocstyle
+  r-gridextra
+  r-knitr
+  r-matrixstats
+  r-mscoreutils
+  r-msdata
+  r-msnbase
+  r-multcomp
+  r-plotly
+  r-refmanager
+  r-rmarkdown
+  r-sessioninfo
+  r-testthat
+  r-tidyverse
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('3c00b46f0e3950dd6cba7c6eb74d85db8f7f1eca050a4732f8b7567b6fac4300')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: