add r-ppinfer

2 files changed, 54 insertions, 0 deletions

diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 000000000000..8732054b7957
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,20 @@
+pkgbase = r-ppinfer
+	pkgdesc = Inferring functionally related proteins using protein interaction networks
+	pkgver = 1.22.0
+	pkgrel = 1
+	url = https://bioconductor.org/packages/PPInfer
+	arch = any
+	license = Artistic2.0
+	depends = r
+	depends = r-biomart
+	depends = r-fgsea
+	depends = r-ggplot2
+	depends = r-httr
+	depends = r-igraph
+	depends = r-kernlab
+	depends = r-stringdb
+	depends = r-yeastexpdata
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/PPInfer_1.22.0.tar.gz
+	sha256sums = 42d7784fe9a8b1293eb3ad6149e940c5fec0304ca9e983971015f1a9e753fc78
+
+pkgname = r-ppinfer
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..c09d168a3a49
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,34 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=PPInfer
+_pkgver=1.22.0
+pkgname=r-${_pkgname,,}
+pkgver=1.22.0
+pkgrel=1
+pkgdesc='Inferring functionally related proteins using protein interaction networks'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-biomart
+  r-fgsea
+  r-ggplot2
+  r-httr
+  r-igraph
+  r-kernlab
+  r-stringdb
+  r-yeastexpdata
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('42d7784fe9a8b1293eb3ad6149e940c5fec0304ca9e983971015f1a9e753fc78')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: