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author46620 AUR BOT2023-10-22 12:44:40 +0000
committer46620 AUR BOT2023-10-22 12:44:40 +0000
commitdd4ac301a100db8a805e9d5b03e2db6032403a60 (patch)
treea34329edd6e6f9e34d8022c41f8b48baf3a78106
parenta6381030d5122ee67f70b04d9286d36ff9d23c3e (diff)
downloadaur-dd4ac301a100db8a805e9d5b03e2db6032403a60.tar.gz
4.4.0.0
-rw-r--r--.SRCINFO7
-rw-r--r--PKGBUILD10
2 files changed, 7 insertions, 10 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 80176876df9e..5fbd12e08ef6 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
pkgbase = gatk-bin
pkgdesc = Variant discovery in high-throughput bioinformatics sequencing data
- pkgver = 4.0.6.0
+ pkgver = 4.4.0.0
pkgrel = 1
url = https://software.broadinstitute.org/gatk-bin
arch = any
@@ -9,12 +9,11 @@ pkgbase = gatk-bin
depends = python
optdepends = r: plot generation for some tools
conflicts = gatk
- source = gatk-bin-4.0.6.0.zip::https://github.com/broadinstitute/gatk/releases/download/4.0.6.0/gatk-4.0.6.0.zip
+ source = gatk-bin-4.4.0.0.zip::https://github.com/broadinstitute/gatk/releases/download/4.4.0.0/gatk-4.4.0.0.zip
source = gatk.sh
source = gatk-bin-license.txt::https://raw.githubusercontent.com/broadinstitute/gatk/d6a7fcd895677424b491df8c4ee6227e34b52251/LICENSE.TXT
- sha512sums = 6d2247ed5f06e61b561347c8d09cc789b38ad0ea7ab254036b0d9638a9c839ba128427cfed146c525f981fae407eb0448b2e10d0a68e679c297872cb19d25a0f
+ sha512sums = e26c0c453716a47d4fba4e879629f5715754994e96baab8a115783cd1fda2ae250e5d1764598dd4d926a5bce9f6d1144e5eec4ef42e75196e6bd698da5760d4c
sha512sums = a9984153bc489bf5814adc8f8bffd92782e7dd031f2b9a0798d2dc005438445f5eefed6ce3b64b776197c49fb8579e4c968e7cdc4398c5df0145e5105cc20271
sha512sums = 9753eef4b1f3aa96b790eaeacbe92ecb9d8fee6de9b918244a519a53b5285d57d2128e62f6a86c5d931d217a72f08e806ff81e95ad8d271c1df737384c81e30e
pkgname = gatk-bin
-
diff --git a/PKGBUILD b/PKGBUILD
index b6077bf4d9b7..0542650e06fe 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,7 +1,7 @@
# Maintainer: Lionel Miller <delonorm@gmail.com>
pkgname=gatk-bin
-pkgver=4.0.6.0
+pkgver=4.4.0.0
pkgrel=1
pkgdesc="Variant discovery in high-throughput bioinformatics sequencing data"
arch=('any')
@@ -15,11 +15,9 @@ source=(
gatk.sh
"${pkgname}-license.txt::https://raw.githubusercontent.com/broadinstitute/gatk/d6a7fcd895677424b491df8c4ee6227e34b52251/LICENSE.TXT"
)
-sha512sums=(
- '6d2247ed5f06e61b561347c8d09cc789b38ad0ea7ab254036b0d9638a9c839ba128427cfed146c525f981fae407eb0448b2e10d0a68e679c297872cb19d25a0f'
- 'a9984153bc489bf5814adc8f8bffd92782e7dd031f2b9a0798d2dc005438445f5eefed6ce3b64b776197c49fb8579e4c968e7cdc4398c5df0145e5105cc20271'
- '9753eef4b1f3aa96b790eaeacbe92ecb9d8fee6de9b918244a519a53b5285d57d2128e62f6a86c5d931d217a72f08e806ff81e95ad8d271c1df737384c81e30e'
-)
+sha512sums=('e26c0c453716a47d4fba4e879629f5715754994e96baab8a115783cd1fda2ae250e5d1764598dd4d926a5bce9f6d1144e5eec4ef42e75196e6bd698da5760d4c'
+ 'a9984153bc489bf5814adc8f8bffd92782e7dd031f2b9a0798d2dc005438445f5eefed6ce3b64b776197c49fb8579e4c968e7cdc4398c5df0145e5105cc20271'
+ '9753eef4b1f3aa96b790eaeacbe92ecb9d8fee6de9b918244a519a53b5285d57d2128e62f6a86c5d931d217a72f08e806ff81e95ad8d271c1df737384c81e30e')
package() {
# I am using the launcher script from the source-based gatk package