Update

2 files changed, 10 insertions, 12 deletions

diff --git a/.SRCINFO b/.SRCINFO
index aeb0748eed91..257e7a64d908 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,6 +1,6 @@
 pkgbase = r-genomicranges
 	pkgdesc = Representation and manipulation of genomic intervals
-	pkgver = 1.46.0
+	pkgver = 1.46.1
 	pkgrel = 1
 	url = https://bioconductor.org/packages/release/bioc/html/GenomicRanges.html
 	arch = i686
@@ -31,7 +31,7 @@ pkgbase = r-genomicranges
 	optdepends = r-kegggraph
 	optdepends = r-rnaseqdata.hnrnpc.bam.chr14
 	optdepends = r-pasillabamsubset
-	optdepends = r-kegg.db
+	optdepends = r-keggrest
 	optdepends = r-hgu95av2.db
 	optdepends = r-hgu95av2probe
 	optdepends = r-bsgenome.scerevisiae.ucsc.saccer2
@@ -44,8 +44,9 @@ pkgbase = r-genomicranges
 	optdepends = r-runit
 	optdepends = r-digest
 	optdepends = r-knitr
+	optdepends = r-rmarkdown
 	optdepends = r-biocstyle
-	source = https://bioconductor.org/packages/release/bioc/src/contrib/GenomicRanges_1.46.0.tar.gz
-	sha256sums = c259366e0074141cbeaf0070cb56c6b718d66b9983f935949e2740e4d8afcd0d
+	source = https://bioconductor.org/packages/release/bioc/src/contrib/GenomicRanges_1.46.1.tar.gz
+	sha256sums = 9df774cd514343a29f57d45a13889bf400d0abeaa2013cd396f7faa6f911798c
 
 pkgname = r-genomicranges
diff --git a/PKGBUILD b/PKGBUILD
index 91f058bed7f4..68f3263f16cc 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
 # Contributor: Grey Christoforo <first name at last name dot net>
 
 _bcname=GenomicRanges
-_bcver=1.46.0
+_bcver=1.46.1
 pkgname=r-${_bcname,,}
 pkgver=${_bcver//[:-]/.}
 pkgrel=1
@@ -11,19 +11,16 @@ arch=(i686 x86_64)
 url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
 license=(Artistic-2.0)
 depends=('r>=4.0.0' 'r-biocgenerics>=0.37.0' 'r-s4vectors>=0.27.12' 'r-iranges>=2.23.9' 'r-genomeinfodb>=1.15.2' 'r-xvector>=0.29.2')
-optdepends=(r-biobase r-annotationdbi r-annotate r-biostrings r-summarizedexperiment r-rsamtools r-genomicalignments r-rtracklayer r-bsgenome r-genomicfeatures r-gviz r-variantannotation r-annotationhub r-deseq2 r-dexseq r-edger r-kegggraph r-rnaseqdata.hnrnpc.bam.chr14 r-pasillabamsubset r-kegg.db r-hgu95av2.db r-hgu95av2probe r-bsgenome.scerevisiae.ucsc.saccer2 r-bsgenome.hsapiens.ucsc.hg19 bsgenome.mmusculus.ucsc.mm10 r-txdb.athaliana.biomart.plantsmart22 txdb.dmelanogaster.ucsc.dm3.ensgene r-txdb.hsapiens.ucsc.hg19.knowngene r-txdb.mmusculus.ucsc.mm10.knowngene r-runit r-digest r-knitr r-biocstyle)
+optdepends=(r-biobase r-annotationdbi r-annotate r-biostrings r-summarizedexperiment r-rsamtools r-genomicalignments r-rtracklayer r-bsgenome r-genomicfeatures r-gviz r-variantannotation r-annotationhub r-deseq2 r-dexseq r-edger r-kegggraph r-rnaseqdata.hnrnpc.bam.chr14 r-pasillabamsubset r-keggrest r-hgu95av2.db r-hgu95av2probe r-bsgenome.scerevisiae.ucsc.saccer2 r-bsgenome.hsapiens.ucsc.hg19 bsgenome.mmusculus.ucsc.mm10 r-txdb.athaliana.biomart.plantsmart22 txdb.dmelanogaster.ucsc.dm3.ensgene r-txdb.hsapiens.ucsc.hg19.knowngene r-txdb.mmusculus.ucsc.mm10.knowngene r-runit r-digest r-knitr r-rmarkdown r-biocstyle)
 source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
-sha256sums=('c259366e0074141cbeaf0070cb56c6b718d66b9983f935949e2740e4d8afcd0d')
+sha256sums=('9df774cd514343a29f57d45a13889bf400d0abeaa2013cd396f7faa6f911798c')
 
 build() {
-  cd "${srcdir}"
-
-  R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l ${srcdir}
+  R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}"
 }
 
 package() {
-  cd "${srcdir}"
-
   install -dm0755 "${pkgdir}/usr/lib/R/library"
+
   cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
 }