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authorLuis Martinez2022-03-30 22:19:49 -0500
committerLuis Martinez2022-03-30 22:19:49 -0500
commite78c8400c2e22dd0c01fd8c905c84a1113f9b752 (patch)
tree955a07a8faef1e4de16f8edff25549f41112744e
parent5972ff12dc9e906003e94ab02b78b68f29e8519b (diff)
downloadaur-e78c8400c2e22dd0c01fd8c905c84a1113f9b752.tar.gz
update to 0.1.18
-rw-r--r--.SRCINFO12
-rw-r--r--CHANGELOG.md7
-rw-r--r--PKGBUILD37
3 files changed, 41 insertions, 15 deletions
diff --git a/.SRCINFO b/.SRCINFO
index 47d788562e90..e94f5f947f50 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,12 +1,18 @@
pkgbase = python-pgmpy
pkgdesc = Probabilistic Graphical Model library
- pkgver = 0.1.17
+ pkgver = 0.1.18
pkgrel = 1
url = https://github.com/pgmpy/pgmpy
changelog = CHANGELOG.md
arch = any
license = MIT
+ checkdepends = python-pytest
+ checkdepends = python-mock
+ checkdepends = python-daft
makedepends = python-setuptools
+ makedepends = python-build
+ makedepends = python-installer
+ makedepends = python-wheel
makedepends = python-sphinx
makedepends = python-nbsphinx
makedepends = python-sphinx_rtd_theme
@@ -21,7 +27,7 @@ pkgbase = python-pgmpy
depends = python-statsmodels
depends = python-pytorch
depends = python-tqdm
- source = python-pgmpy-0.1.17.tar.gz::https://github.com/pgmpy/pgmpy/archive/v0.1.17.tar.gz
- sha256sums = 1b2bc18dfcdb0d1f7d966061978b3ac5771849da5861f2a80dbea5ed799e5b3b
+ source = python-pgmpy-0.1.18.tar.gz::https://github.com/pgmpy/pgmpy/archive/v0.1.18.tar.gz
+ sha256sums = 89b5d95e3f5f8e862a2a09c9ef0b7fbd62467803c550f1b8c19759d7ffc679d5
pkgname = python-pgmpy
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 86eea2529944..b264470f8a2e 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -4,6 +4,13 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
+## [0.1.18] - 2021-03-30
+### Fixed
+1. Fixes `CausalInference.is_valid_backdoor_adjustment_set` to accept str arguments for `Z`.
+2. Fixes `BayesianNetwork.remove_cpd` to work with integral node names.
+3. Fixes `MPLP.map_query` to return the variable states instead of probability values.
+4. Fixes BIFWriter to generate output in standard BIF format.
+
## [0.1.17] - 2021-12-30
### Added
1. Adds BayesianNetwork.states property to store states of all the variables.
diff --git a/PKGBUILD b/PKGBUILD
index 690c5b7637ef..938daa2a4ecb 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,7 +1,7 @@
# Maintainer: Luis Martinez <luis dot martinez at disroot dot org>
pkgname=python-pgmpy
-pkgver=0.1.17
+pkgver=0.1.18
pkgrel=1
pkgdesc="Probabilistic Graphical Model library"
arch=('any')
@@ -21,29 +21,42 @@ depends=(
'python-tqdm')
makedepends=(
'python-setuptools'
+ 'python-build'
+ 'python-installer'
+ 'python-wheel'
'python-sphinx'
'python-nbsphinx'
'python-sphinx_rtd_theme')
-# checkdepends=('python-pytest' 'python-mock' 'python-daft')
+checkdepends=('python-pytest' 'python-mock' 'python-daft')
changelog=CHANGELOG.md
source=("$pkgname-$pkgver.tar.gz::$url/archive/v$pkgver.tar.gz")
-sha256sums=('1b2bc18dfcdb0d1f7d966061978b3ac5771849da5861f2a80dbea5ed799e5b3b')
+sha256sums=('89b5d95e3f5f8e862a2a09c9ef0b7fbd62467803c550f1b8c19759d7ffc679d5')
+
+prepare() {
+ cd "pgmpy-$pkgver"
+ sed -i '/"tests"/s/tests/*tests*/' setup.py
+}
build() {
cd "pgmpy-$pkgver"
- python setup.py build
- cd docs
- make man BUILDDIR=_build
+ python -m build --wheel --no-isolation
+ make -C docs man BUILDDIR=_build
}
-# check() {
-# cd "pgmpy-$pkgver"
-# pytest
-# }
+check() {
+ cd "pgmpy-$pkgver"
+ pytest -x --disable-warnings
+}
package() {
+ export PYTHONHASHSEED=0
cd "pgmpy-$pkgver"
- PYTHONHASHSEED=0 python setup.py install --root="$pkgdir/" --optimize=1 --skip-build
- install -Dm644 LICENSE -t "$pkgdir/usr/share/licenses/$pkgname/"
+ python -m installer --destdir="$pkgdir/" dist/*.whl
install -Dm644 docs/_build/man/pgmpy.1 -t "$pkgdir/usr/share/man/man1/"
+
+ local _site="$(python -c 'import site; print(site.getsitepackages()[0])')"
+ install -d "$pkgdir/usr/share/licenses/$pkgname/"
+ ln -s \
+ "$_site/pgmpy-$pkgver.dist-info/LICENSE" \
+ "$pkgdir/usr/share/licenses/$pkgname/"
}