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authorBioArchLinuxBot2023-05-22 16:12:19 +0000
committerBioArchLinuxBot2023-05-22 16:12:19 +0000
commiteccb72d793cf3d682d6e144969237edd6f1e5a4a (patch)
tree044a881c40491b571774356bc806a20c9f2ef1cd
parentc8a1bda03aa7c1b3525b94dd381cd7d064578cee (diff)
downloadaur-eccb72d793cf3d682d6e144969237edd6f1e5a4a.tar.gz
[lilac] updated to 3.0.0-2
-rw-r--r--.SRCINFO2
-rw-r--r--PKGBUILD5
2 files changed, 5 insertions, 2 deletions
diff --git a/.SRCINFO b/.SRCINFO
index f92c1d34506c..cbf9aeafd448 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,7 +1,7 @@
pkgbase = picard-tools
pkgdesc = set of tools for working with next generation sequencing data in the BAM format
pkgver = 3.0.0
- pkgrel = 1
+ pkgrel = 2
url = https://github.com/broadinstitute/picard
arch = any
license = MIT
diff --git a/PKGBUILD b/PKGBUILD
index 736cc96cb624..d12b87d6da39 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -4,7 +4,7 @@
pkgname=picard-tools
_pkgname=picard
pkgver=3.0.0
-pkgrel=1
+pkgrel=2
pkgdesc='set of tools for working with next generation sequencing data in the BAM format'
arch=(any)
url="https://github.com/broadinstitute/picard"
@@ -18,5 +18,8 @@ build(){
./gradlew shadowJar
}
package() {
+ echo "java -jar /usr/share/$pkgname/picard.jar" >> $pkgname
+ chmod +x $pkgname
+ install -Dm 755 $pkgname $pkgdir/usr/bin/$pkgname
install -Dm 755 $srcdir/$_pkgname/build/libs/picard.jar $pkgdir/usr/share/$pkgname/picard.jar
}