diff options
| author | Roberto Rossini | 2019-05-12 21:22:45 +0200 |
|---|---|---|
| committer | Roberto Rossini | 2019-05-12 21:22:45 +0200 |
| commit | fcd753b7554b08a2aaae7c3070674066e025aefc (patch) | |
| tree | 964e01f31f7c301344fb6fdea528d232cad81682 | |
| download | aur-fcd753b7554b08a2aaae7c3070674066e025aefc.tar.gz | |
Initial import
| -rw-r--r-- | .SRCINFO | 16 | ||||
| -rw-r--r-- | PKGBUILD | 40 |
2 files changed, 56 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..0ada84ce6482 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,16 @@ +pkgbase = stringtie + pkgdesc = A fast and highly efficient assembler of RNA-Seq alignments into potential transcripts. + pkgver = 1.3.6 + pkgrel = 1 + url = https://ccb.jhu.edu/software/stringtie/index.shtml + arch = x86_64 + license = Artistic2.0 + depends = gcc-libs + depends = zlib + provides = stringtie + conflicts = stringtie + source = https://ccb.jhu.edu/software/stringtie/dl/stringtie-1.3.6.tar.gz + sha256sums = 9dbdf01ab3282dc6eb647409920b53f8e0df45f4c45faf9d6b5ca135a3738ee8 + +pkgname = stringtie + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..8132e149e0e4 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,40 @@ +# Maintainer: Roberto Rossini ("robymetallo") <roberto.rossini.9533@student.uu.se> + +pkgname=stringtie +pkgver=1.3.6 +pkgrel=1 +pkgdesc="A fast and highly efficient assembler of RNA-Seq\ + alignments into potential transcripts." + +url='https://ccb.jhu.edu/software/stringtie/index.shtml' +arch=('x86_64') + +license=('Artistic2.0') + +depends=('gcc-libs' 'zlib') + +provides=('stringtie') +conflicts=('stringtie') + +source=("https://ccb.jhu.edu/software/$pkgname/dl/$pkgname-$pkgver.tar.gz") +sha256sums=('9dbdf01ab3282dc6eb647409920b53f8e0df45f4c45faf9d6b5ca135a3738ee8') + +build() { + cd $srcdir/$pkgname-$pkgver/ + + make release +} + +check() { + cd $srcdir/$pkgname-$pkgver/ + ./stringtie --version | grep -Fxq "$pkgver" +} + +package() { + cd $srcdir/$pkgname-$pkgver/ + + install -Dm755 $srcdir/$pkgname-$pkgver/$pkgname $pkgdir/usr/bin/$pkgname + + install -Dm644 LICENSE $pkgdir/usr/share/licenses/$pkgname/LICENSE +} + |