diff options
| author | Christian Krause | 2015-06-13 11:56:16 +0200 |
|---|---|---|
| committer | Christian Krause | 2015-06-13 11:56:16 +0200 |
| commit | ffaa4baa56358c8139e50c009e6380df49af1063 (patch) | |
| tree | 71fc79ac53706f771a98f61ea05c19c6869466b5 | |
| download | aur-ffaa4baa56358c8139e50c009e6380df49af1063.tar.gz | |
Initial import
| -rw-r--r-- | .AURINFO | 13 | ||||
| -rw-r--r-- | .SRCINFO | 14 | ||||
| -rw-r--r-- | PKGBUILD | 26 |
3 files changed, 53 insertions, 0 deletions
diff --git a/.AURINFO b/.AURINFO new file mode 100644 index 000000000000..d1a9d3ffaa71 --- /dev/null +++ b/.AURINFO @@ -0,0 +1,13 @@ +pkgbase = cd-hit + pkgdesc = clustering DNA/protein sequence database at high identity with tolerance + pkgver = 4.6.1 + pkgrel = 1 + url = https://code.google.com/p/cdhit/ + arch = i686 + arch = x86_64 + license = GPL2 + depends = perl + source = https://cdhit.googlecode.com/files/cd-hit-v4.6.1-2012-08-27.tgz + +pkgname = cd-hit + diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..f3e8339a61a8 --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,14 @@ +pkgbase = cd-hit + pkgdesc = clustering DNA/protein sequence database at high identity with tolerance + pkgver = 4.6.1 + pkgrel = 1 + url = https://code.google.com/p/cdhit/ + arch = i686 + arch = x86_64 + license = GPL2 + depends = perl + source = https://cdhit.googlecode.com/files/cd-hit-v4.6.1-2012-08-27.tgz + sha1sums = 744be987a963e368ad46efa59227ea313c35ef5d + +pkgname = cd-hit + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..5ba21f05dd93 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,26 @@ +# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com> + +pkgname=cd-hit +pkgver=4.6.1 +pkgrel=1 +pkgdesc="clustering DNA/protein sequence database at high identity with tolerance" +arch=('i686' 'x86_64') +url="https://code.google.com/p/cdhit/" +license=('GPL2') +depends=('perl') +source=(https://cdhit.googlecode.com/files/cd-hit-v$pkgver-2012-08-27.tgz) +sha1sums=('744be987a963e368ad46efa59227ea313c35ef5d') + +build() { + cd "$srcdir/cd-hit-v$pkgver-2012-08-27" + + make openmp=yes +} + +package() { + cd "$srcdir/cd-hit-v$pkgver-2012-08-27" + + for file in cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454 *.pl ; do + install -Dm755 "$file" "$pkgdir/usr/bin/$file" + done +} |