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authorLev Levitsky2021-03-26 16:00:49 +0300
committerLev Levitsky2021-03-26 16:00:49 +0300
commit4e6fc8ea1ea063bc881e7aa1ae767fb4601b2533 (patch)
tree3f9cada0a37fc3b0dbfc8dab80b3562e5c0555fa /CHANGELOG
parentf08b68a3f1b7ffa1eee2039b0455557b79efdc1f (diff)
downloadaur-4e6fc8ea1ea063bc881e7aa1ae767fb4601b2533.tar.gz
4.4.2
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+4.4.2
+-----
+
+ - Add cleavage rules from `MS ontology <http://purl.obolibrary.org/obo/MS_1001045>`_ as
+ :py:data:`pyteomics.parser.psims_rules`. :py:func:`pyteomics.parser.cleave` now understands keys and accessions from
+ :py:data:`psims_rules` as rules.
+
+ - Improve mzIdentML parser performance (and possibly others in some cases) by relying more on offset indexes
+ (`#34 <https://github.com/levitsky/pyteomics/pull/34>`_ by Joshua Klein).
+
+ - Extend the :py:class:`pyteomics.mztab.MzTab` parser with auto-generated properties. Almost all metadata entities are
+ now exposed as properties on the parser object (`#23 <https://github.com/levitsky/pyteomics/pull/23>`_ by Joshua Klein).
+
+ - Fix the version parsing in :py:mod:`pyteomics.mztab` to support shorter vMzTab version strings
+ (`#24 <https://github.com/levitsky/pyteomics/pull/24>`_ by Donavan See).
+
+ - Tweak the :py:class:`pyteomics.pepxml.PepXML` parser to present some values that were previously reported as None.
+
+ - Fix compatibility with :py:mod:`SQLAlchemy` 1.4 (`#32 <https://github.com/levitsky/pyteomics/pull/32>`_ by Joshua Klein).
+
4.4.1
-----