summarylogtreecommitdiffstats
path: root/PKGBUILD
diff options
context:
space:
mode:
authorGrey Christoforo2016-02-16 12:34:33 +0000
committerGrey Christoforo2016-02-16 12:34:33 +0000
commit1899c04ed705e3e450d298afa421dc63460f1b72 (patch)
treecf24bf97254cc960e4c7c8d1d0ad54acbbd350a9 /PKGBUILD
parent2a4299953b26d240ec69084b8ee3259f457deef2 (diff)
downloadaur-1899c04ed705e3e450d298afa421dc63460f1b72.tar.gz
bump to 2.2.7
Diffstat (limited to 'PKGBUILD')
-rw-r--r--PKGBUILD10
1 files changed, 3 insertions, 7 deletions
diff --git a/PKGBUILD b/PKGBUILD
index e5aa851713e3..1c74d05c7342 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,15 +2,15 @@
# Maintainer: Grey Christoforo <first name [at] last name [dot] net>
pkgname=bowtie2
-pkgver=2.2.6
-pkgrel=6
+pkgver=2.2.7
+pkgrel=1
pkgdesc="Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequence."
arch=("any")
optdepends=('intel-tbb: faster multithreading')
url="http://bowtie-bio.sourceforge.net/bowtie2"
license=('GPL3')
source=("https://github.com/BenLangmead/${pkgname}/archive/v${pkgver}.tar.gz")
-md5sums=('9e5d10dff2424177e8051092ff502bb6')
+md5sums=('01381a2b89c72b4c4fac0d198590d198')
prepare() {
cd "${srcdir}/${pkgname}-${pkgver}"
@@ -35,10 +35,6 @@ package() {
cp -a "${srcdir}/${pkgname}-${pkgver}"/* "${pkgdir}/opt/${pkgname}"/.
cd "${srcdir}/${pkgname}-${pkgver}"
make DESTDIR="${pkgdir}" install
- #mkdir -p ${pkgdir}/usr/share/doc/${pkgname}
- #cp -a doc/* ${pkgdir}/usr/share/doc/${pkgname}/.
- #cp -a example ${pkgdir}/usr/share/doc/${pkgname}
- #cp -a scripts ${pkgdir}/usr/share/doc/${pkgname}
install -Dm644 ${srcdir}/${pkgname}-${pkgver}/MANUAL -t "${pkgdir}/usr/share/doc/${pkgname}"
install -Dm644 ${srcdir}/${pkgname}-${pkgver}/LICENSE -t "$pkgdir/usr/share/licenses/${pkgname}"
}