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1 files changed, 38 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Dimitris Kiziridis <ragouel at outlook dot com>
+
+pkgname=mass-up
+pkgver=1.0.14
+pkgrel=1
+pkgdesc="An open-source mass spectrometry software for proteomics designed to support the preprocessing and Machine-Learning based analysis of MALDI-TOF mass spectrometry data"
+arch=('x86_64')
+url='http://www.sing-group.org/mass-up'
+license=('GPL3')
+depends=('readline6'
+         'r-rjava'
+         'java-environment'
+         'libxtst'
+         'libxslt'
+         'alsa-lib'
+         'gtk2'
+         'libglvnd'
+         'libnet')
+source=("${pkgname}-${pkgver}.tar.gz::http://static.sing-group.org/MassUp/installers/Mass-Up-${pkgver}.linux.x64.tar.gz")
+sha256sums=('84d9512c42c2d67231702d96c1605ae51dc6a52c09bf3123fc302048061fc55e')
+
+package() {
+  install -d "${pkgdir}/opt"
+  cp -avR Mass-Up-${pkgver}.linux.x64 "${pkgdir}/opt/Mass-Up"
+  echo "#!/usr/bin/env bash
+  cd /opt/Mass-Up/
+  ./run.sh" > mass-up
+  install -Dm755 mass-up -t "${pkgdir}/usr/bin"
+  install -Dm644 Mass-Up-${pkgver}.linux.x64/Mass-UpSplashScreen.png "${pkgdir}/usr/share/pixmaps/${pkgname}.png"
+  gendesk -f -n --pkgname "${pkgname}" \
+          --pkgdesc "$pkgdesc" \
+          --name "Mass-Up" \
+          --comment "$pkgdesc" \
+          --exec "${pkgname}" \
+          --categories 'Development;Application' \
+          --icon "${pkgname}"
+  install -Dm644 "${pkgname}.desktop" -t "${pkgdir}/usr/share/applications"
+}
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