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author | Christian Krause | 2016-05-29 20:31:49 +0200 |
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committer | Christian Krause | 2016-05-29 20:31:49 +0200 |
commit | 164976a8bdfebf93218c20a10c0e587f4671d507 (patch) | |
tree | fd81a7034ba08ef09663f8b6af7f1ce2646518dc /PKGBUILD | |
parent | c362bf8a633616ffdbfda5f07460b7c1112c54eb (diff) | |
download | aur-164976a8bdfebf93218c20a10c0e587f4671d507.tar.gz |
picard-tools-2.4.1-1
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 10 |
1 files changed, 2 insertions, 8 deletions
@@ -1,7 +1,7 @@ # Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com> pkgname=picard-tools -pkgver=2.1.1 +pkgver=2.4.1 pkgrel=1 pkgdesc='set of tools for working with next generation sequencing data in the BAM format' arch=('i686' 'x86_64') @@ -11,7 +11,7 @@ depends=('bash' 'java-runtime>=6') source=("https://github.com/broadinstitute/picard/releases/download/$pkgver/$pkgname-$pkgver.zip" 'picard-profile.sh' 'picard.sh') -md5sums=('4593fc3a392158731612a7d595f0e505' +md5sums=('c59cfd7bd38ccdb334c70f675ae18c76' 'ebcda2d2c55df6d05994252cf22a68c2' '0987aa56f62f5e843bfa788cc93626c8') @@ -22,12 +22,6 @@ package() { install -Dm755 $f $pkgdir/usr/share/java/picard-tools/$f done - install -Dm755 libIntelDeflater.so $pkgdir/usr/lib/libIntelDeflater.so - - pushd $pkgdir/usr/share/java/picard-tools > /dev/null - ln -s ../../../lib/libIntelDeflater.so - popd > /dev/null - install -Dm755 $srcdir/picard.sh $pkgdir/usr/bin/picard install -Dm755 $srcdir/picard-profile.sh $pkgdir/etc/profile.d/picard.sh } |