Initial PKGBUILD version of PLINK.

1 files changed, 32 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..c939310d1466
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,32 @@
+# Maintainer: Stunts <f.pinamartins@gmail.com>
+pkgname=plink
+pkgver=1.07
+pkgrel=1
+pkgdesc="Whole genome association analysis toolset"
+arch=('i686' 'x86_64')
+license=('GPL')
+url="http://pngu.mgh.harvard.edu/~purcell/plink/"
+depends=('r' 'zlib' 'lapack')
+source=(http://pngu.mgh.harvard.edu/~purcell/plink/dist/${pkgname}-${pkgver}-src.zip
+        current_gcc.patch)
+md5sums=('4566376791df4e69459b849bd7078fa3'
+         '407ef451ca255ff201bffbba37d0a4e2')
+
+prepare() {
+  cd ${srcdir}/${pkgname}-${pkgver}-src
+  sed -i 's/WITH_LAPACK = /&1/g' Makefile
+  sed -i 's/CXXFLAGS = //' Makefile
+  sed -i 's/FORCE_DYNAMIC = /&1/' Makefile
+  patch -p1 < ../current_gcc.patch
+}
+
+build() {
+  cd ${srcdir}/${pkgname}-${pkgver}-src
+  make
+}
+
+package() {
+    cd ${srcdir}/${pkgname}-${pkgver}-src
+    install -d ${pkgdir}/usr/bin
+    install -D -m 755 plink ${pkgdir}/usr/bin/plink
+}