diff options
| author | Sukanka | 2022-06-06 02:32:48 +0800 |
|---|---|---|
| committer | Sukanka | 2022-06-06 02:32:48 +0800 |
| commit | 26500769ccefebcb73c96690f2b1ea7687045c8f (patch) | |
| tree | d149a138b4aab207bdec18e87c1bf016b923b0e2 /PKGBUILD | |
| download | aur-26500769ccefebcb73c96690f2b1ea7687045c8f.tar.gz | |
add r-beadarray
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 52 |
1 files changed, 52 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..e12046333ab3 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,52 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=beadarray +_pkgver=2.46.0 +pkgname=r-${_pkgname,,} +pkgver=2.46.0 +pkgrel=1 +pkgdesc='Quality assessment and low-level analysis for Illumina BeadArray data' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('MIT') +depends=( + r + r-annotationdbi + r-beaddatapackr + r-biobase + r-biocgenerics + r-genomicranges + r-ggplot2 + r-hexbin + r-illuminaio + r-iranges + r-limma + r-reshape2 +) +optdepends=( + r-affy + r-beadarrayexampledata + r-biocstyle + r-ggbio + r-gridextra + r-hwriter + r-illuminahumanv3.db + r-knitr + r-lumi + r-nozzle.r1 + r-txdb.hsapiens.ucsc.hg19.knowngene + r-vsn +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('5eee2652d15de2ee28411d7bdba7946be10ee899a88312b65e1fb0c9aa43c326') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |