Fixed PKGBUILD. Update to 0.32.0

1 files changed, 20 insertions, 10 deletions

diff --git a/PKGBUILD b/PKGBUILD
index 06de1df08a7c..c075a8c86a72 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,19 +1,29 @@
+# Maintainer: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
 # Contributor: Grey Christoforo <first name at last name dot net>
+
+_bcname=BiocGenerics
+_bcver=0.32.0
 pkgname=r-biocgenerics
-_bc_name=BiocGenerics
-pkgver=0.32.0
+pkgver=${_bcver//[:-]/.}
 pkgrel=1
-pkgdesc="S4 generic functions needed by many Bioconductor packages."
-url="https://bioconductor.org/packages/release/bioc/html/BiocGenerics.html"
-arch=("x86_64")
+pkgdesc="S4 generic functions used in Bioconductor"
+url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
+arch=(any)
 license=('Artistic-2.0')
-depends=('r' 'r-utils')
-source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bc_name}_${pkgver}.tar.gz")
+depends=('r>=3.6.0')
+optdepends=('r-biobase' 'r-s4vectors' 'r-iranges' 'r-genomicranges' 'r-delayedarray' 'r-biostrings' 'r-rsamtools' 'r-annotationdbi' 'r-oligoclasses' 'r-oligo' 'r-affayplm' 'r-flowclust' 'r-affy' 'r-desq2' 'r-msnbase' 'r-annotate' 'r-runit')
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
 sha1sums=('66b520133bf7d072d3039fec85183bb3f0cae68b')
 
+build(){
+  cd "${srcdir}"
+
+  R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l $srcdir
+}
+
 package() {
- mkdir -p $pkgdir/usr/lib/R/library
- cd $srcdir
+  cd "${srcdir}"
 
- R CMD INSTALL -l $pkgdir/usr/lib/R/library ./${_bc_name}
+  install -dm0755 "$pkgdir/usr/lib/R/library"
+  cp -a --no-preserve=ownership "$_bcname" "$pkgdir/usr/lib/R/library"
 }