add r-biomartr

1 files changed, 51 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..3cc9b29a4989
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,51 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=biomartr
+_pkgver=1.0.2
+pkgname=r-${_pkgname,,}
+pkgver=1.0.2
+pkgrel=3
+pkgdesc='Genomic Data Retrieval'
+arch=('x86_64')
+url="https://cran.r-project.org/package=${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biomart
+  r-biostrings
+  r-curl
+  r-data.table
+  r-downloader
+  r-dplyr
+  r-fs
+  r-httr
+  r-jsonlite
+  r-philentropy
+  r-purrr
+  r-r.utils
+  r-rcurl
+  r-readr
+  r-stringr
+  r-tibble
+  r-xml
+)
+optdepends=(
+  r-devtools
+  r-knitr
+  r-magrittr
+  r-rmarkdown
+  r-seqinr
+  r-testthat
+)
+source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('7fd6cccd915aa39e593fb7591107ab9792d98a119dd42f3f666e5184f4e42743')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: