add r-bluster

1 files changed, 49 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..e5ebb921d6a1
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,49 @@
+# system requirements: C++11
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=bluster
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=1.6.0
+pkgrel=1
+pkgdesc='Clustering Algorithms for Bioconductor'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-biocneighbors
+  r-biocparallel
+  r-igraph
+  r-rcpp
+  r-s4vectors
+  gcc
+)
+optdepends=(
+  r-apcluster
+  r-biocstyle
+  r-dynamictreecut
+  r-knitr
+  r-kohonen
+  r-mbkmeans
+  r-pheatmap
+  r-rmarkdown
+  r-scater
+  r-scran
+  r-scrnaseq
+  r-scuttle
+  r-testthat
+  r-viridis
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('681356e8ff7f8be93115a733f18b8a66a4ae8e841d59908d831ab67a983789bc')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: