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authorBioArchLinuxBot2023-10-27 09:07:39 +0000
committerBioArchLinuxBot2023-10-27 09:07:39 +0000
commitb7361abb29c2cd5978a487d66920515840fe7e62 (patch)
treee2f157032c746592d7b436eb451c67dea18eb26d /PKGBUILD
parent5b8663aa28c2a7918ce8b6f85a043adfc9b178a0 (diff)
downloadaur-b7361abb29c2cd5978a487d66920515840fe7e62.tar.gz
[lilac] updated to 1.70.0-1
Diffstat (limited to 'PKGBUILD')
-rw-r--r--PKGBUILD8
1 files changed, 5 insertions, 3 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 7c75a64ee426..355875f21ec7 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=BSgenome
-_pkgver=1.68.0
+_pkgver=1.70.0
pkgname=r-${_pkgname,,}
-pkgver=1.68.0
+pkgver=1.70.0
pkgrel=1
pkgdesc='Software infrastructure for efficient representation of full genomes and their SNPs'
arch=('any')
@@ -12,6 +12,7 @@ license=('Artistic2.0')
depends=(
r
r-biocgenerics
+ r-biocio
r-biostrings
r-genomeinfodb
r-genomicranges
@@ -32,6 +33,7 @@ optdepends=(
r-bsgenome.mmusculus.ucsc.mm10
r-bsgenome.rnorvegicus.ucsc.rn5
r-bsgenome.scerevisiae.ucsc.saccer1
+ r-bsgenomeforge
r-hgu95av2probe
r-runit
r-snplocs.hsapiens.dbsnp144.grch38
@@ -40,7 +42,7 @@ optdepends=(
r-xtrasnplocs.hsapiens.dbsnp144.grch38
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('e87f529b584af53c55414bfeb0ccb9b093c64748d992c0bd8ac82ee8ffaca23b')
+sha256sums=('8e92437497773e3ad2325003fc2dcd8c608ce3805bdef3cf88a4c85f73ac0891')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"