add r-cfdnapro

1 files changed, 42 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..fcd55dc502a5
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,42 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=cfDNAPro
+_pkgver=1.2.0
+pkgname=r-${_pkgname,,}
+pkgver=1.2.0
+pkgrel=1
+pkgdesc='cfDNAPro Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-dplyr
+  r-ggplot2
+  r-magrittr
+  r-quantmod
+  r-rlang
+  r-rsamtools
+  r-stringr
+)
+optdepends=(
+  r-biocstyle
+  r-devtools
+  r-ggpubr
+  r-knitr
+  r-rmarkdown
+  r-scales
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('803187b841cd8fc307c03ea63258484359a1c901dc63e8e29251504bc4b875ad')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: