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authorBioArchLinuxBot2023-04-29 07:02:27 +0000
committerBioArchLinuxBot2023-04-29 07:02:27 +0000
commit965fafcaf5c6c893310db780c4fd37b463ec5124 (patch)
tree40bafd8833db0ccdb5a0fc85cc6edb93f1adcbcb /PKGBUILD
parent050ef2f6fb2151723234ca44a3ac38d4542e8dfd (diff)
downloadaur-965fafcaf5c6c893310db780c4fd37b463ec5124.tar.gz
[lilac] updated to 1.6.0-1
Diffstat (limited to 'PKGBUILD')
-rw-r--r--PKGBUILD11
1 files changed, 6 insertions, 5 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 9142c6126f8a..b9aa1a06bc89 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,9 +1,9 @@
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=cfDNAPro
-_pkgver=1.4.0
+_pkgver=1.6.0
pkgname=r-${_pkgname,,}
-pkgver=1.4.0
+pkgver=1.6.0
pkgrel=1
pkgdesc='cfDNAPro Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy'
arch=('any')
@@ -12,6 +12,9 @@ license=('GPL')
depends=(
r
r-biocgenerics
+ r-bsgenome.hsapiens.ncbi.grch38
+ r-bsgenome.hsapiens.ucsc.hg19
+ r-bsgenome.hsapiens.ucsc.hg38
r-dplyr
r-genomeinfodb
r-genomicalignments
@@ -28,8 +31,6 @@ depends=(
)
optdepends=(
r-biocstyle
- r-bsgenome.hsapiens.ucsc.hg19
- r-bsgenome.hsapiens.ucsc.hg38
r-devtools
r-ggpubr
r-knitr
@@ -38,7 +39,7 @@ optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
-sha256sums=('7276758ad677a1cf280f945483adf3e4485f25ff263c0b092165c4e5a47f8110')
+sha256sums=('365b1fb038bcc1dbd4cacf990e6d11fcf9ec1615083d335da3dfb9fa58e36b17')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"