add r-consensusseeker

1 files changed, 41 insertions, 0 deletions

diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..48ed8e36daf9
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,41 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=consensusSeekeR
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=1.24.0
+pkgrel=1
+pkgdesc='Detection of consensus regions inside a group of experiences using genomic positions and genomic ranges'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('Artistic2.0')
+depends=(
+  r
+  r-biocgenerics
+  r-biocparallel
+  r-genomeinfodb
+  r-genomicranges
+  r-iranges
+  r-rtracklayer
+  r-s4vectors
+  r-stringr
+)
+optdepends=(
+  r-biocstyle
+  r-ggplot2
+  r-knitr
+  r-rmarkdown
+  r-runit
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('23e493c809f76f5d474b501d5650c8cd2e3feece9d310ffb5b46ce7a32f581d9')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: